RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 MOXD2PA6NHM9 499 aa14□□□□□ -0.17
HERC3-207ENST00000452979 ATP2A1O14983 1001 aa14□□□□□ -0.17
HERC3-207ENST00000452979 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
HERC3-207ENST00000452979 RAG1P15918 1043 aa14□□□□□ -0.17
HERC3-207ENST00000452979 SBK1Q52WX2 424 aa14□□□□□ -0.17
HERC3-207ENST00000452979 ZNF467Q7Z7K2 595 aaPredicted RBP14□□□□□ -0.17
HERC3-207ENST00000452979 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
HERC3-207ENST00000452979 RNPC3Q96LT9 517 aaKnown RBP14□□□□□ -0.17
HERC3-207ENST00000452979 SLF1Q9BQI6 1058 aa14□□□□□ -0.17
HERC3-207ENST00000452979 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
HERC3-207ENST00000452979 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
HERC3-207ENST00000452979 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
HERC3-207ENST00000452979 ARPP21Q9UBL0 812 aaPredicted RBP14□□□□□ -0.17
HERC3-207ENST00000452979 CNPY2Q9Y2B0 182 aa14□□□□□ -0.17
HERC3-207ENST00000452979 SYNRGQ9UMZ2 1314 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 F5H6K3 240 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
HERC3-207ENST00000452979 FPGSQ05932 587 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 KLRC3Q07444 240 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 GIMAP6Q6P9H5 292 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
HERC3-207ENST00000452979 PRPF38AQ8NAV1 312 aaKnown RBP13.99□□□□□ -0.17
HERC3-207ENST00000452979 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
HERC3-207ENST00000452979 STARD7Q9NQZ5 370 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 PRUNE2Q8WUY3 3088 aa13.99□□□□□ -0.17
HERC3-207ENST00000452979 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 TIMP1P01033 207 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 FOSL2P15408 326 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 RASA1P20936 1047 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 CDK7P50613 346 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 KCNA10Q16322 511 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 MKL1Q969V6 931 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
HERC3-207ENST00000452979 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
HERC3-207ENST00000452979 ELP1O95163 1332 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 GSG1L2A8MUP6 293 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 NDUFB10O96000 172 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 SNRNP48Q6IEG0 339 aaKnown RBP13.97□□□□□ -0.17
HERC3-207ENST00000452979 DDX11Q96FC9 970 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 NUP88Q99567 741 aaPredicted RBP13.97□□□□□ -0.17
HERC3-207ENST00000452979 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 TBX21Q9UL17 535 aa13.97□□□□□ -0.17
HERC3-207ENST00000452979 MROH7Q68CQ1 1323 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 RAD21O60216 631 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 NKX3-2P78367 333 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 ACVR2BQ13705 512 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 GRIN2CQ14957 1233 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 PCSK9Q8NBP7 692 aaKnown RBP13.96□□□□□ -0.17
HERC3-207ENST00000452979 SYMPKQ92797 1274 aaKnown RBP13.96□□□□□ -0.17
HERC3-207ENST00000452979 GLT1D1Q96MS3 346 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 LRRCC1Q9C099 1032 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 UPF3AQ9H1J1 476 aaKnown RBP13.96□□□□□ -0.17
HERC3-207ENST00000452979 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
HERC3-207ENST00000452979 MCM3APO60318 1980 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 MYADML2A6NDP7 307 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 ADCY6O43306 1168 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 ZBED4O75132 1171 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 DNAJB2P25686 324 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 OAZ1P54368 228 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 GJA9P57773 515 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 FGD4Q96M96 766 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.18
HERC3-207ENST00000452979 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
HERC3-207ENST00000452979 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
HERC3-207ENST00000452979 MINDY4BA8MYZ0 360 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 ASGR1P07306 291 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 CCDC144BQ3MJ40 725 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 ECHDC1Q9NTX5 307 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
HERC3-207ENST00000452979 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
HERC3-207ENST00000452979 ARVCFO00192 962 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 CTAGE5O15320 804 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 C6orf222P0C671 652 aaPredicted RBP13.93□□□□□ -0.18
HERC3-207ENST00000452979 FDX1P10109 184 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 IRX5P78411 483 aaPredicted RBP13.93□□□□□ -0.18
HERC3-207ENST00000452979 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms