RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 RPUSD2Q8IZ73 545 aaKnown RBP8.79□□□□□ -1
HDLBP-222ENST00000449504 SPICE1Q8N0Z3 855 aa8.79□□□□□ -1
HDLBP-222ENST00000449504 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
HDLBP-222ENST00000449504 SCLYQ96I15 445 aa8.79□□□□□ -1
HDLBP-222ENST00000449504 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
HDLBP-222ENST00000449504 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
HDLBP-222ENST00000449504 ZNF236Q9UL36 1845 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 MYO9BQ13459 2157 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 SNAI1O95863 264 aaPredicted RBP8.78□□□□□ -1
HDLBP-222ENST00000449504 CD4P01730 458 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 CYP7A1P22680 504 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 ARID4AP29374 1257 aaPredicted RBP8.78□□□□□ -1
HDLBP-222ENST00000449504 SHMT1P34896 483 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 SLC4A3P48751 1232 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 BEX3Q00994 111 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 GRB10Q13322 594 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 DEFB128Q7Z7B8 93 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 TTC6Q86TZ1 520 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 FAM178BQ8IXR5 827 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 ANKS1AQ92625 1134 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 PHOX2BQ99453 314 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 TRPV6Q9H1D0 765 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 MUC6Q6W4X9 2439 aa8.78□□□□□ -1
HDLBP-222ENST00000449504 SMCHD1A6NHR9 2005 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1.01
HDLBP-222ENST00000449504 CST5P28325 142 aaPredicted RBP8.77□□□□□ -1.01
HDLBP-222ENST00000449504 STAT3P40763 770 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 PLCD1P51178 756 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 TAP1Q03518 808 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 ACVR2BQ13705 512 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 TTLL4Q14679 1199 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 TTC39AQ5SRH9 613 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 CXCL17Q6UXB2 119 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 NOL8Q76FK4 1167 aaKnown RBP8.77□□□□□ -1.01
HDLBP-222ENST00000449504 RIOX2Q8IUF8 465 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 DDX11Q96FC9 970 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 NOC4LQ9BVI4 516 aaKnown RBP8.77□□□□□ -1.01
HDLBP-222ENST00000449504 WNT8AQ9H1J5 351 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 EHD4Q9H223 541 aa8.77□□□□□ -1.01
HDLBP-222ENST00000449504 NCOR1O75376 2440 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 ROBO3Q96MS0 1386 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 SRGAP3O43295 1099 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 ADCY6O43306 1168 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 RAD21O60216 631 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 CYP2E1P05181 493 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-222ENST00000449504 IL9P15248 144 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 KCNA5P22460 613 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 GJA9P57773 515 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 SPRED2Q7Z698 418 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 CLEC10AQ8IUN9 316 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 SSH1Q8WYL5 1049 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 KCNH6Q9H252 994 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 UBE2ZQ9H832 354 aaPredicted RBP8.76□□□□□ -1.01
HDLBP-222ENST00000449504 FBXO28Q9NVF7 368 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 GBF1Q92538 1859 aa8.76□□□□□ -1.01
HDLBP-222ENST00000449504 XIRP2A4UGR9 3374 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 PIEZO1Q92508 2521 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 DCXO43602 365 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 ST18O60284 1047 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 B4GALT4O60513 344 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
HDLBP-222ENST00000449504 ACTN1P12814 892 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 ITGA7Q13683 1181 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 CCDC158Q5M9N0 1113 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.75□□□□□ -1.01
HDLBP-222ENST00000449504 ARHGEF10LQ9HCE6 1279 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
HDLBP-222ENST00000449504 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
HDLBP-222ENST00000449504 MTUS1Q9ULD2 1270 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 HDAC5Q9UQL6 1122 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 ZNF536O15090 1300 aa8.75□□□□□ -1.01
HDLBP-222ENST00000449504 LPXNO60711 386 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 ZAP70P43403 619 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 PSMC6P62333 389 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 G3BP1Q13283 466 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDLBP-222ENST00000449504 LEXMQ3ZCV2 418 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 PTCRAQ6ISU1 281 aaPredicted RBP8.74□□□□□ -1.01
HDLBP-222ENST00000449504 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 HFE2Q6ZVN8 426 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 HERC6Q8IVU3 1022 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 MSL3Q8N5Y2 521 aaKnown RBP8.74□□□□□ -1.01
HDLBP-222ENST00000449504 MAGEB6Q8N7X4 407 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 GDPD5Q8WTR4 605 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 VWCEQ96DN2 955 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 DCBLD2Q96PD2 775 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 SLC9A7Q96T83 725 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 MEIS3Q99687 375 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 FTOQ9C0B1 505 aaKnown RBP eCLIP8.74□□□□□ -1.013e-8■■■■□ 24.2
HDLBP-222ENST00000449504 UPF3AQ9H1J1 476 aaKnown RBP8.74□□□□□ -1.01
HDLBP-222ENST00000449504 ABHD16BQ9H3Z7 469 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 VCPKMTQ9H867 229 aa8.74□□□□□ -1.01
HDLBP-222ENST00000449504 PRRC2BQ5JSZ5 2229 aaKnown RBP8.74□□□□□ -1.01
HDLBP-222ENST00000449504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-222ENST00000449504 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms