RNA–Protein interactions for RNA: ENST00000449491.1

USP25-205, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 5

Gene USP25, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-205ENST00000449491 ATG4CQ96DT6 458 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 MAP6Q96JE9 813 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 HHIPL1Q96JK4 782 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 ANTXR1Q9H6X2 564 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 GMIPQ9P107 970 aa6.73□□□□□ -1.33
USP25-205ENST00000449491 NRDCO43847 1150 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 RAG1P15918 1043 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 PDE6BP35913 854 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 WAPLQ7Z5K2 1190 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 LINC00116Q8NCU8 138 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 PRDM14Q9GZV8 571 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP25-205ENST00000449491 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 TCFL5Q9UL49 500 aa6.72□□□□□ -1.33
USP25-205ENST00000449491 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
USP25-205ENST00000449491 PRAMEF1O95521 474 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 HOXA5P20719 270 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 RNF4P78317 190 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 SSPNQ14714 243 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 KIR3DS1Q14943 382 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 TMEM192Q8IY95 271 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
USP25-205ENST00000449491 NKD1Q969G9 470 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
USP25-205ENST00000449491 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 TGIF2Q9GZN2 237 aa6.71□□□□□ -1.34
USP25-205ENST00000449491 MBD1Q9UIS9 605 aaPredicted RBP6.71□□□□□ -1.34
USP25-205ENST00000449491 SDHBP21912 280 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 KIR2DL1P43626 348 aaPredicted RBP6.7□□□□□ -1.34
USP25-205ENST00000449491 KIR2DL2P43627 348 aaPredicted RBP6.7□□□□□ -1.34
USP25-205ENST00000449491 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 GK5Q6ZS86 529 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 REXO1Q8N1G1 1221 aaKnown RBP6.7□□□□□ -1.34
USP25-205ENST00000449491 PANK1Q8TE04 598 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 SYTL4Q96C24 671 aaPredicted RBP6.7□□□□□ -1.34
USP25-205ENST00000449491 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 ASCC2Q9H1I8 757 aaPredicted RBP6.7□□□□□ -1.34
USP25-205ENST00000449491 NCANO14594 1321 aa6.7□□□□□ -1.34
USP25-205ENST00000449491 PRRG2O14669 202 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 FKTNO75072 461 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 SYPP08247 313 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 CTSKP43235 329 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 GJA8P48165 433 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 ADGRF1Q5T601 910 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 CEP128Q6ZU80 1094 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 NLRC3Q7RTR2 1065 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 CRTAC1Q9NQ79 661 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 ZMYM5Q9UJ78 669 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 KCTD3Q9Y597 815 aa6.69□□□□□ -1.34
USP25-205ENST00000449491 OR14I1A6ND48 311 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 FADS2P1A8MWK0 482 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 NME1P15531 152 aaKnown RBP6.68□□□□□ -1.34
USP25-205ENST00000449491 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
USP25-205ENST00000449491 MLECQ14165 292 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 RASGRP4Q8TDF6 673 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 GPRASP2Q96D09 838 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 CNTD2Q9H8S5 307 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 EPB41L4AQ9HCS5 686 aaPredicted RBP6.68□□□□□ -1.34
USP25-205ENST00000449491 GINM1Q9NU53 330 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 CNOT6Q9ULM6 557 aaKnown RBP6.68□□□□□ -1.34
USP25-205ENST00000449491 ZNRF3Q9ULT6 936 aa6.68□□□□□ -1.34
USP25-205ENST00000449491 MEIS3P2A8K0S8 358 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 E9PSI1 815 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 HRKO00198 91 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 PNLIPP16233 465 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
USP25-205ENST00000449491 VIPR1P32241 457 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 MCM4P33991 863 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 BUD31P41223 144 aaPredicted RBP6.67□□□□□ -1.34
USP25-205ENST00000449491 ZNF165P49910 485 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 EPHB3P54753 998 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 YBX1P67809 324 aaKnown RBP6.67□□□□□ -1.34
USP25-205ENST00000449491 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 TMEM52Q8NDY8 209 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 KCNC2Q96PR1 638 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 SLC9A7Q96T83 725 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 PARD6AQ9NPB6 346 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 PPT2Q9UMR5 302 aa6.67□□□□□ -1.34
USP25-205ENST00000449491 B8ZZF3 427 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 TNFRSF10CO14798 259 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 CLEC3AO75596 197 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 CCNFP41002 786 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 SOX9P48436 509 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 RTP1P59025 263 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
USP25-205ENST00000449491 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 CHST7Q9NS84 486 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
USP25-205ENST00000449491 A0A0G2JLL6 359 aaPredicted RBP6.65□□□□□ -1.34
USP25-205ENST00000449491 SHOXO15266 292 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 TRIM13O60858 407 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 ACRP10323 421 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 BMP7P18075 431 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 CTSWP56202 376 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 CHMP4BP1P59074 171 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 ERVFRD-1P60508 538 aa6.65□□□□□ -1.34
USP25-205ENST00000449491 HSF5Q4G112 596 aaPredicted RBP6.65□□□□□ -1.34
USP25-205ENST00000449491 MARCH10Q8NA82 808 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms