RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RASGRP4Q8TDF6 673 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 PPP1R13BQ96KQ4 1090 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 KIF2CQ99661 725 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 LSM14BQ9BX40 385 aaKnown RBP11.53□□□□□ -0.56
CTC1-202ENST00000449476 COBLO75128 1261 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 XRCC5P13010 732 aaKnown RBP11.53□□□□□ -0.56
CTC1-202ENST00000449476 SCNN1DP51172 638 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 ZBTB16Q05516 673 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA8FQ08AF8 430 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 GOLGA8DPQ0D2H9 430 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 PRR16Q569H4 304 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
CTC1-202ENST00000449476 SAMD15Q9P1V8 674 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 ZDHHC9Q9Y397 364 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 ATP10DQ9P241 1426 aa11.53□□□□□ -0.56
CTC1-202ENST00000449476 STAMBPO95630 424 aa11.52□□□□□ -0.56
CTC1-202ENST00000449476 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.56
CTC1-202ENST00000449476 MED14O60244 1454 aa11.52□□□□□ -0.56
CTC1-202ENST00000449476 DKC1O60832 514 aaKnown RBP eCLIP11.52□□□□□ -0.57
CTC1-202ENST00000449476 GAS7O60861 476 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 MCAMP43121 646 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
CTC1-202ENST00000449476 TSNARE1Q96NA8 513 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 SOS2Q07890 1332 aaPredicted RBP11.52□□□□□ -0.57
CTC1-202ENST00000449476 SETD1BQ9UPS6 1966 aaKnown RBP11.52□□□□□ -0.57
CTC1-202ENST00000449476 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 BCRP11274 1271 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 NCBP1Q09161 790 aaKnown RBP11.52□□□□□ -0.57
CTC1-202ENST00000449476 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 ABCA6Q8N139 1617 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 STAT1P42224 750 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 STRBPQ96SI9 672 aaKnown RBP11.52□□□□□ -0.57
CTC1-202ENST00000449476 PICK1Q9NRD5 415 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
CTC1-202ENST00000449476 CROCC2H7BZ55 1655 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 POLD1P28340 1107 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 PPFIA1Q13136 1202 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 ZNF365Q70YC5 407 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 TUBGCP2Q9BSJ2 902 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 MAN1B1Q9UKM7 699 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 GPATCH11Q8N954 259 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 PLEKHA4Q9H4M7 779 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 DDX25Q9UHL0 483 aaKnown RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 DDX41Q9UJV9 622 aaKnown RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 CYP2D7A0A087X1C5 515 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 CDC25AP30304 524 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 RASSF4Q9H2L5 321 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 PANK4Q9NVE7 773 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 STK32BQ9NY57 414 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 XDHP47989 1333 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 A6NNZ2 444 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 STRN3Q13033 797 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 TUBB8Q3ZCM7 444 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 TTC31Q49AM3 519 aaPredicted RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
CTC1-202ENST00000449476 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 NKIRAS1Q9NYS0 192 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
CTC1-202ENST00000449476 CCDC6Q16204 474 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 HLFQ16534 295 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ADGRB3O60242 1522 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ATP2A2P16615 1042 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 KCNQ4P56696 695 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 LIN9Q5TKA1 542 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 SUSD4Q5VX71 490 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 CEP57Q86XR8 500 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 ANKRD13CQ8N6S4 541 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 U2AF1L4Q8WU68 220 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 CNOT6LQ96LI5 555 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 SRPRBQ9Y5M8 271 aaKnown RBP11.5□□□□□ -0.57
CTC1-202ENST00000449476 LAMC1P11047 1609 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 QRICH2Q9H0J4 1663 aa11.5□□□□□ -0.57
CTC1-202ENST00000449476 PPIP5K2O43314 1243 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms