RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
VCP-203ENST00000448530 CYBAP13498 195 aa23.33■■□□□ 1.33
VCP-203ENST00000448530 MAML3Q96JK9 1138 aa23.33■■□□□ 1.33
VCP-203ENST00000448530 OSBPL3Q9H4L5 887 aa23.33■■□□□ 1.33
VCP-203ENST00000448530 CCDC171Q6TFL3 1326 aa23.33■■□□□ 1.32
VCP-203ENST00000448530 PLXNA1Q9UIW2 1896 aa23.32■■□□□ 1.32
VCP-203ENST00000448530 FGAP02671 866 aa23.32■■□□□ 1.32
VCP-203ENST00000448530 IKQ13123 557 aaPredicted RBP23.32■■□□□ 1.32
VCP-203ENST00000448530 CPXCR1Q8N123 301 aa23.32■■□□□ 1.32
VCP-203ENST00000448530 TRPV1Q8NER1 839 aa23.32■■□□□ 1.32
VCP-203ENST00000448530 INCENPQ9NQS7 918 aa23.32■■□□□ 1.32
VCP-203ENST00000448530 ORC4O43929 436 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 IGHA2P01877 340 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 PGK2P07205 417 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 HSPD1P10809 573 aaKnown RBP23.31■■□□□ 1.32
VCP-203ENST00000448530 SDSP20132 328 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 SLC1A4P43007 532 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 CHURC1Q8WUH1 139 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 DDX11Q96FC9 970 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 GMCL1Q96IK5 515 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 DIAPH3Q9NSV4 1193 aa23.31■■□□□ 1.32
VCP-203ENST00000448530 DIS3Q9Y2L1 958 aaKnown RBP23.31■■□□□ 1.32
VCP-203ENST00000448530 TMEM232C9JQI7 657 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 ATP2A1O14983 1001 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 SEPT4O43236 478 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 FDX1P10109 184 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 STAT2P52630 851 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 RRP12Q5JTH9 1297 aaKnown RBP23.3■■□□□ 1.32
VCP-203ENST00000448530 ZNF589Q86UQ0 364 aaPredicted RBP23.3■■□□□ 1.32
VCP-203ENST00000448530 SLC38A10Q9HBR0 1119 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 TRIOBPQ9H2D6 2365 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 PFASO15067 1338 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
VCP-203ENST00000448530 HIP1O00291 1037 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 COL6A1P12109 1028 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 MCCP23508 829 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 FAM160B2Q86V87 743 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 ARRDC4Q8NCT1 418 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 CHMP4CQ96CF2 233 aa23.29■■□□□ 1.32
VCP-203ENST00000448530 RAVER2Q9HCJ3 691 aaKnown RBP23.29■■□□□ 1.32
VCP-203ENST00000448530 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
VCP-203ENST00000448530 NMT2O60551 498 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 OAZ1P54368 228 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 ZNF792Q3KQV3 632 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 PRAMEF19Q5SWL8 479 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 TINF2Q9BSI4 451 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 IL17RBQ9NRM6 502 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 FBXO40Q9UH90 709 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 RIPK3Q9Y572 518 aa23.28■■□□□ 1.32
VCP-203ENST00000448530 DNM1LO00429 736 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 MYCNP04198 464 aaPredicted RBP23.27■■□□□ 1.32
VCP-203ENST00000448530 FGRP09769 529 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 HAND2P61296 217 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 ANO1Q5XXA6 986 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 STAG1Q8WVM7 1258 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 SENP6Q9GZR1 1112 aaPredicted RBP23.27■■□□□ 1.32
VCP-203ENST00000448530 ZMYND8Q9ULU4 1186 aaPredicted RBP23.27■■□□□ 1.32
VCP-203ENST00000448530 MTMR7Q9Y216 660 aa23.27■■□□□ 1.32
VCP-203ENST00000448530 KBTBD13C9JR72 458 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 FXR1P51114 621 aaKnown RBP eCLIP23.26■■□□□ 1.31
VCP-203ENST00000448530 RCSD1Q6JBY9 416 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 CWC27Q6UX04 472 aaKnown RBP23.26■■□□□ 1.31
VCP-203ENST00000448530 MFSD6Q6ZSS7 791 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 ANKRD35Q8N283 1001 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 CHST13Q8NET6 341 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 CNPY2Q9Y2B0 182 aa23.26■■□□□ 1.31
VCP-203ENST00000448530 PCP11498 1178 aaKnown RBP23.25■■□□□ 1.31
VCP-203ENST00000448530 CCDC96Q2M329 555 aa23.25■■□□□ 1.31
VCP-203ENST00000448530 KCTD1Q719H9 257 aa23.25■■□□□ 1.31
VCP-203ENST00000448530 RNF41Q9H4P4 317 aaPredicted RBP23.25■■□□□ 1.31
VCP-203ENST00000448530 TACC3Q9Y6A5 838 aa23.25■■□□□ 1.31
VCP-203ENST00000448530 PLA2G6O60733 806 aa23.24■■□□□ 1.31
VCP-203ENST00000448530 LRRC26Q2I0M4 334 aa23.24■■□□□ 1.31
VCP-203ENST00000448530 AKNAD1Q5T1N1 836 aa23.24■■□□□ 1.31
VCP-203ENST00000448530 GJC2Q5T442 439 aaPredicted RBP23.24■■□□□ 1.31
VCP-203ENST00000448530 MSL3Q8N5Y2 521 aaKnown RBP23.24■■□□□ 1.31
VCP-203ENST00000448530 HOMER2Q9NSB8 354 aa23.24■■□□□ 1.31
VCP-203ENST00000448530 ZNF213O14771 459 aa23.23■■□□□ 1.31
VCP-203ENST00000448530 RARBP10826 455 aa23.23■■□□□ 1.31
VCP-203ENST00000448530 TOP1P11387 765 aaKnown RBP23.23■■□□□ 1.31
VCP-203ENST00000448530 SYN1P17600 705 aa23.23■■□□□ 1.31
VCP-203ENST00000448530 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
VCP-203ENST00000448530 DCAF4Q8WV16 495 aa23.23■■□□□ 1.31
VCP-203ENST00000448530 TCP11L1Q9NUJ3 509 aa23.23■■□□□ 1.31
VCP-203ENST00000448530 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 DNAJC25-GNG10A0A024R161 153 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 NOVP48745 357 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 PRO3102Q9H379 93 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 ACAD9Q9H845 621 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 XPNPEP3Q9NQH7 507 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 SYNGAP1Q96PV0 1343 aa23.22■■□□□ 1.31
VCP-203ENST00000448530 A0A1W2PPC1 479 aa23.21■■□□□ 1.31
VCP-203ENST00000448530 AKR1A1P14550 325 aa23.21■■□□□ 1.31
VCP-203ENST00000448530 ATN1P54259 1190 aaPredicted RBP23.21■■□□□ 1.31
VCP-203ENST00000448530 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
VCP-203ENST00000448530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
VCP-203ENST00000448530 ZNF467Q7Z7K2 595 aaPredicted RBP23.21■■□□□ 1.31
VCP-203ENST00000448530 ESR2Q92731 530 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms