RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 IGFALSP35858 605 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 GABREP78334 506 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 FOXD4Q12950 439 aaPredicted RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 CFAP100Q494V2 611 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 WDR78Q5VTH9 848 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 TDRD10Q5VZ19 366 aaKnown RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 IL31Q6EBC2 164 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 CHSY3Q70JA7 882 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 UBE2R2Q712K3 238 aaPredicted RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 FGD2Q7Z6J4 655 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 PPFIBP1Q86W92 1011 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 SPICE1Q8N0Z3 855 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 OSBP2Q969R2 916 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 SLC6A18Q96N87 628 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 HAUS7Q99871 368 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 UBE2OQ9C0C9 1292 aaKnown RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 ADAM19Q9H013 955 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 MTFR1LQ9H019 292 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.86□□□□□ -1.63
PMS1-216ENST00000447734 KRT82Q9NSB4 513 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 DNAJB12Q9NXW2 375 aaKnown RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 ADAM30Q9UKF2 790 aa4.86□□□□□ -1.63
PMS1-216ENST00000447734 LUC7L2Q9Y383 392 aaKnown RBP4.86□□□□□ -1.63
PMS1-216ENST00000447734 APBA3O96018 575 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 APPP05067 770 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 C6orf222P0C671 652 aaPredicted RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 CPB1P15086 417 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 BPIP17213 487 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 CCND1P24385 295 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 GRK4P32298 578 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 GRIA2P42262 883 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 ID4P47928 161 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SCNN1BP51168 640 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 NEK3P51956 506 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 GSTM4Q03013 218 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 LMOD3Q0VAK6 560 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SART3Q15020 963 aaKnown RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 MINDY4Q4G0A6 757 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 ACBD5Q5T8D3 534 aaPredicted RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 ADAT2Q7Z6V5 191 aaKnown RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 FCHSD1Q86WN1 690 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 TPH2Q8IWU9 490 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 PHACTR4Q8IZ21 702 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 GSTCDQ8NEC7 633 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SMARCC1Q92922 1105 aaPredicted RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 FGD4Q96M96 766 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SENP7Q9BQF6 1050 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 CORO1BQ9BR76 489 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SARGQ9BW04 601 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 PTPRHQ9HD43 1115 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 ATG3Q9NT62 314 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SUCOQ9UBS9 1254 aaKnown RBP4.85□□□□□ -1.63
PMS1-216ENST00000447734 APEX2Q9UBZ4 518 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 SUSD2Q9UGT4 822 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 DAAM1Q9Y4D1 1078 aa4.85□□□□□ -1.63
PMS1-216ENST00000447734 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 DCDC2CA8MYV0 355 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 NOP56O00567 594 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 SOX1O00570 391 aaPredicted RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 TBX3O15119 743 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 MAFGO15525 162 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 SNUPNO95149 360 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 CYP11A1P05108 521 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 YARSP54577 528 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 ETF1P62495 437 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 GRB10Q13322 594 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 PDE3AQ14432 1141 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 ABCB5Q2M3G0 1257 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 CDCA2Q69YH5 1023 aaPredicted RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 IQSEC1Q6DN90 963 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 CYFIP1Q7L576 1253 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 FAM35AQ86V20 835 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 FAM13CQ8NE31 585 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 PJA1Q8NG27 643 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 USP33Q8TEY7 942 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 TIFAQ96CG3 184 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 ACSF2Q96CM8 615 aaPredicted RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 LGR4Q9BXB1 951 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 GBP3Q9H0R5 595 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 CCDC86Q9H6F5 360 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 CRTAC1Q9NQ79 661 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 SH2B1Q9NRF2 756 aaPredicted RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 NOP53Q9NZM5 478 aaKnown RBP4.84□□□□□ -1.63
PMS1-216ENST00000447734 RCAN3Q9UKA8 241 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 TRIM33Q9UPN9 1127 aa4.84□□□□□ -1.63
PMS1-216ENST00000447734 RASSF10A6NK89 507 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 B4E1Z4 1266 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 H3BRJ5 948 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 TBX1O43435 398 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 PRKD3O94806 890 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 MYBL2P10244 700 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 PF4V1P10720 104 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 GBP1P32455 592 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 GATA4P43694 442 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 IL2P60568 153 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 POU4F3Q15319 338 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms