RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SLC16A2P36021 539 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 TPM4P67936 248 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 IL17AQ16552 155 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ASPRV1Q53RT3 343 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 GALNT17Q6IS24 598 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 KANK3Q6NY19 840 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 KCTD1Q719H9 257 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 COA7Q96BR5 231 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 IDI2Q9BXS1 227 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 PPP1R1BQ9UD71 204 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ADAMTSL1Q8N6G6 1762 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 M0R2N6 131 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZNF500O60304 480 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZBTB7AO95365 584 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 GNA11P29992 359 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 CDC25AP30304 524 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 STAMQ92783 540 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC34Q96HJ3 373 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 BPIFA3Q9BQP9 254 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 EHD4Q9H223 541 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 TCP10L2B9ZVM9 353 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 GDF11O95390 407 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 TPM3P06753 285 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 EEF2P13639 858 aaKnown RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 KCNA3P22001 575 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 SMARCA1P28370 1054 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 CASP1P29466 404 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 LETM2Q2VYF4 491 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 JAKMIP3Q5VZ66 844 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 SARM1Q6SZW1 724 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 ADGRF4Q8IZF3 695 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 DAGLBQ8NCG7 672 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 PSMD14O00487 310 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 CCNT1O60563 726 aaKnown RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 SMC2O95347 1197 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 TPM2P07951 284 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 DTHD1Q6ZMT9 781 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 PAGE5Q96GU1 130 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 KCNF1Q9H3M0 494 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 TMEM260Q9NX78 707 aa10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
COL6A4P1-201ENST00000446690 MYO3BQ8WXR4 1341 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 SLFN14P0C7P3 912 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 SNHG28P0DPA3 235 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 BMP6P22004 513 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 SEPT2Q15019 361 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 RSBN1LQ6PCB5 846 aaPredicted RBP10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 C4orf32Q8N8J7 132 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 JMJD4Q9H9V9 463 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 MORC2Q9Y6X9 1032 aaPredicted RBP10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
COL6A4P1-201ENST00000446690 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 SLC1A4P43007 532 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 NCAPHQ15003 741 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 NONOQ15233 471 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 DLGAP5Q15398 846 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 ABCB5Q2M3G0 1257 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 HSP90AA4PQ58FG1 418 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 REXO1Q8N1G1 1221 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 MRFAP1L1Q96HT8 127 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 KANSL2Q9H9L4 492 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 TMOD2Q9NZR1 351 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 IFNKQ9P0W0 207 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 TXLNAP40222 546 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 MYL5Q02045 173 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 ICA1Q05084 483 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 LRMPQ12912 555 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 CCDC144BQ3MJ40 725 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 GRIPAP1Q4V328 841 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 GPATCH4Q5T3I0 446 aaKnown RBP10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 IQUBQ8NA54 791 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 TBCKQ8TEA7 893 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
COL6A4P1-201ENST00000446690 PSMD1Q99460 953 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms