RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 USP17L21D6R901 530 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 POLR2DO15514 142 aaKnown RBP9.44□□□□□ -0.9
PTPN3-204ENST00000446349 GABPAQ06546 454 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 CHST3Q7LGC8 479 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 GCNAQ96QF7 691 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 C1orf112Q9NSG2 853 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 JCADQ9P266 1359 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 PDE6AP16499 860 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 USPL1Q5W0Q7 1092 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
PTPN3-204ENST00000446349 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
PTPN3-204ENST00000446349 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 ADGRB3O60242 1522 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPN3-204ENST00000446349 PLCB1Q9NQ66 1216 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 ABCC4O15439 1325 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 E7EWF7 191 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 ASNSP08243 561 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 GJC1P36383 396 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 SLC8A2Q9UPR5 921 aa9.44□□□□□ -0.9
PTPN3-204ENST00000446349 KLRF2D3W0D1 207 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 PTGS1P23219 599 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 EXOC4Q96A65 974 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 TTC1Q99614 292 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 STAT2P52630 851 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 GRAPQ13588 217 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SETDB1Q15047 1291 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 ZNF569Q5MCW4 686 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 GRAPLQ8TC17 118 aaPredicted RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 GRK7Q8WTQ7 553 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 DDX25Q9UHL0 483 aaKnown RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 KIAA0825Q8IV33 1275 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 TNNQ9UQP3 1299 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SCG2P13521 617 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 CCDC122Q5T0U0 273 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 MYOCDQ8IZQ8 938 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 P3H4Q92791 437 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 OR52Z1P0C646 297 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 STAT1P42224 750 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 VPS52Q8N1B4 723 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 ERBB3P21860 1342 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 SPATA31A3Q5VYP0 1347 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 CAPN9O14815 690 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 KRT19P08727 400 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 G2E3Q7L622 706 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
PTPN3-204ENST00000446349 MED10Q9BTT4 135 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 BCAP29Q9UHQ4 241 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 NLRP12P59046 1061 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 FAM178BQ8IXR5 827 aa9.43□□□□□ -0.9
PTPN3-204ENST00000446349 ZWINTO95229 277 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 SLC7A3Q8WY07 619 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 INO80BQ9C086 356 aaPredicted RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 MMP14P50281 582 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 SLC12A2P55011 1212 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 FYB2Q5VWT5 728 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 PLA2G4DQ86XP0 818 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 IFT20Q8IY31 132 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 RAB17Q9H0T7 212 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 ZNF189O75820 626 aaPredicted RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 CD19P15391 556 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 SFMBT2Q5VUG0 894 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 GIMAP7Q8NHV1 300 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 ANKRD36BP1Q96IX9 119 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 ABT1Q9ULW3 272 aaKnown RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 TMEM191BP0C7N4 346 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 EVCP57679 992 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 IGSF22Q8N9C0 903 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 MTMR3Q13615 1198 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 TMEM206Q9H813 350 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 CDC37Q16543 378 aaPredicted RBP9.42□□□□□ -0.9
PTPN3-204ENST00000446349 FAM167AQ96KS9 214 aa9.42□□□□□ -0.9
PTPN3-204ENST00000446349 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms