RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 CCDC129Q6ZRS4 1044 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 ADAMTS19Q8TE59 1207 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 ASB2Q96Q27 587 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
UBE2F-216ENST00000445676 MROH7Q68CQ1 1323 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 ADCY6O43306 1168 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 RLBP1P12271 317 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 CSF2RAP15509 400 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
UBE2F-216ENST00000445676 COPB2P35606 906 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 CDK8P49336 464 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 CDK7P50613 346 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 SLFNL1Q499Z3 407 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
UBE2F-216ENST00000445676 CCDC17Q96LX7 622 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 IL1RAPL2Q9NP60 686 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
UBE2F-216ENST00000445676 FAM184BQ9ULE4 1060 aa17.84■□□□□ 0.45
UBE2F-216ENST00000445676 PRRC2BQ5JSZ5 2229 aaKnown RBP17.84■□□□□ 0.45
UBE2F-216ENST00000445676 XIRP2A4UGR9 3374 aa17.83■□□□□ 0.45
UBE2F-216ENST00000445676 ELP1O95163 1332 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 GOLIM4O00461 696 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 DUSP11O75319 330 aaKnown RBP17.83■□□□□ 0.44
UBE2F-216ENST00000445676 ACRP10323 421 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 C12orf60Q5U649 245 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 C16orf86Q6ZW13 317 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 GLT1D1Q96MS3 346 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
UBE2F-216ENST00000445676 LRRC37A2A6NM11 1700 aa17.83■□□□□ 0.44
UBE2F-216ENST00000445676 TRANK1O15050 2925 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 DNAJC25-GNG10A0A024R161 153 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 MBD4O95243 580 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 ASGR1P07306 291 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 C6orf222P0C671 652 aaPredicted RBP17.82■□□□□ 0.44
UBE2F-216ENST00000445676 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 FAM126BQ8IXS8 530 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 UHRF1Q96T88 793 aaPredicted RBP17.82■□□□□ 0.44
UBE2F-216ENST00000445676 PPP1R12CQ9BZL4 782 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 UPF3AQ9H1J1 476 aaKnown RBP17.82■□□□□ 0.44
UBE2F-216ENST00000445676 GOPCQ9HD26 462 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 RIPK3Q9Y572 518 aa17.82■□□□□ 0.44
UBE2F-216ENST00000445676 RAD21O60216 631 aa17.81■□□□□ 0.44
UBE2F-216ENST00000445676 MRPS5P82675 430 aaKnown RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 PSRC1Q6PGN9 363 aaPredicted RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 FGD4Q96M96 766 aa17.81■□□□□ 0.44
UBE2F-216ENST00000445676 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 TEX13BQ9BXU2 312 aa17.81■□□□□ 0.44
UBE2F-216ENST00000445676 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
UBE2F-216ENST00000445676 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
UBE2F-216ENST00000445676 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
UBE2F-216ENST00000445676 USP17L12C9JPN9 530 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 USP17L21D6R901 530 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 ARVCFO00192 962 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 ADD2P35612 726 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 PLA2G5P39877 138 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 TMEM199Q8N511 208 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 PCSK9Q8NBP7 692 aaKnown RBP17.8■□□□□ 0.44
UBE2F-216ENST00000445676 RHPN1Q8TCX5 695 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE2F-216ENST00000445676 NKX2-4Q9H2Z4 354 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
UBE2F-216ENST00000445676 BRWD1Q9NSI6 2320 aa17.8■□□□□ 0.44
UBE2F-216ENST00000445676 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 APBB1O00213 710 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 CTAGE5O15320 804 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 CHGBP05060 677 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 IGFBP4P22692 258 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 CYP2C18P33260 490 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 GJA9P57773 515 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 RAB30Q15771 203 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 CCDC144BQ3MJ40 725 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
UBE2F-216ENST00000445676 HERVK_113Q902F9 699 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 VTI1AQ96AJ9 217 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 IL23AQ9NPF7 189 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 MSRAQ9UJ68 235 aa17.79■□□□□ 0.44
UBE2F-216ENST00000445676 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
UBE2F-216ENST00000445676 SCN5AQ14524 2016 aa17.78■□□□□ 0.44
UBE2F-216ENST00000445676 CD4P01730 458 aa17.78■□□□□ 0.44
UBE2F-216ENST00000445676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBE2F-216ENST00000445676 NECAB3Q96P71 396 aaPredicted RBP17.78■□□□□ 0.44
UBE2F-216ENST00000445676 LCTP09848 1927 aa17.78■□□□□ 0.44
UBE2F-216ENST00000445676 UMODL1Q5DID0 1318 aa17.77■□□□□ 0.44
UBE2F-216ENST00000445676 GNASQ5JWF2 1037 aa17.77■□□□□ 0.44
UBE2F-216ENST00000445676 KATNBL1Q9H079 304 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 1770.2 ms