RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
SMARCAL1-210ENST00000445153 A0A0C4DFX4 3053 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 GPAA1O43292 621 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 ADAMTS4O75173 837 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
SMARCAL1-210ENST00000445153 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 MKL1Q969V6 931 aa16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 FGD4Q96M96 766 aa16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
SMARCAL1-210ENST00000445153 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 ADCY6O43306 1168 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 AKR1A1P14550 325 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 CCSAPQ6IQ19 270 aaPredicted RBP16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 RNF180Q86T96 592 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 IFNL3Q8IZI9 196 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 CEP95Q96GE4 821 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 MTMR4Q9NYA4 1195 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
SMARCAL1-210ENST00000445153 MYADML2A6NDP7 307 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 COPB2P35606 906 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 KLHDC9Q8NEP7 349 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 TTYH1Q9H313 450 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 SLC38A10Q9HBR0 1119 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 TACC3Q9Y6A5 838 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
SMARCAL1-210ENST00000445153 KIAA0355O15063 1070 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 PQBP1O60828 265 aaKnown RBP16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 APPP05067 770 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 CLTBP09497 229 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 TDO2P48775 406 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 ACLYP53396 1101 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 FAAP100Q0VG06 881 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 KCNA10Q16322 511 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 ZNF697Q5TEC3 545 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
SMARCAL1-210ENST00000445153 ZBED4O75132 1171 aa16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 GNAT2P19087 354 aa16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 INCENPQ9NQS7 918 aa16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 ZHX1Q9UKY1 873 aaPredicted RBP16.91■□□□□ 0.3
SMARCAL1-210ENST00000445153 FOXP2O15409 715 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 CNTN2Q02246 1040 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 ANKRD33Q7Z3H0 272 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 GMCL1P1Q8NEA9 526 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 COL25A1Q9BXS0 654 aaPredicted RBP16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 TMEM39AQ9NV64 488 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 MYH4Q9Y623 1939 aa16.9■□□□□ 0.3
SMARCAL1-210ENST00000445153 CTAGE5O15320 804 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 DUSP11O75319 330 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 TTLL1O95922 423 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 RAG1P15918 1043 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 TFAP4Q01664 338 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 STARD7Q9NQZ5 370 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 ZNF536O15090 1300 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 CUL9Q8IWT3 2517 aa16.89■□□□□ 0.29
SMARCAL1-210ENST00000445153 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 BMP3P12645 472 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 CDK7P50613 346 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 PPARAQ07869 468 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 ARMCX2Q7L311 632 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
SMARCAL1-210ENST00000445153 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms