RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 PGK1P00558 417 aa18.41■□□□□ 0.54
SEC13-213ENST00000445064 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
SEC13-213ENST00000445064 RAVER2Q9HCJ3 691 aaKnown RBP18.41■□□□□ 0.54
SEC13-213ENST00000445064 MTMR10Q9NXD2 777 aa18.41■□□□□ 0.54
SEC13-213ENST00000445064 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
SEC13-213ENST00000445064 DNAH12Q6ZR08 3092 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 PLXNA1Q9UIW2 1896 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 SNX17Q15036 470 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 SH3RF1Q7Z6J0 888 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 LRRC47Q8N1G4 583 aaKnown RBP18.4■□□□□ 0.54
SEC13-213ENST00000445064 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 NACAP1Q9BZK3 213 aa18.4■□□□□ 0.54
SEC13-213ENST00000445064 TTLL1O95922 423 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 TSPY3P0CV98 308 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 TSPY8P0CW00 308 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 TFAP4Q01664 338 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 ZMYM1Q5SVZ6 1142 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 RNF180Q86T96 592 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 BADQ92934 168 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 LENG1Q96BZ8 264 aaPredicted RBP18.39■□□□□ 0.53
SEC13-213ENST00000445064 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 NAPBQ9H115 298 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 FEM1BQ9UK73 627 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 PHF24Q9UPV7 400 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 CNPY2Q9Y2B0 182 aa18.39■□□□□ 0.53
SEC13-213ENST00000445064 DNAJC25-GNG10A0A024R161 153 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 TRIM43BA6NCK2 446 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 ATP2A1O14983 1001 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 SNAI1O95863 264 aaPredicted RBP18.38■□□□□ 0.53
SEC13-213ENST00000445064 AKR1A1P14550 325 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 TLE2Q04725 743 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 PDE4BQ07343 736 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 PPARAQ07869 468 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 SHHQ15465 462 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 C1orf53Q5VUE5 145 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 TRIM43Q96BQ3 446 aaPredicted RBP18.38■□□□□ 0.53
SEC13-213ENST00000445064 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 PDLIM7Q9NR12 457 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 MYH4Q9Y623 1939 aa18.38■□□□□ 0.53
SEC13-213ENST00000445064 POTEB2H3BUK9 544 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 BMP3P12645 472 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 MX1P20591 662 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 CCDC129Q6ZRS4 1044 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 STXBP5LQ9Y2K9 1186 aa18.37■□□□□ 0.53
SEC13-213ENST00000445064 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
SEC13-213ENST00000445064 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 ANKRD45Q5TZF3 282 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 MAMDC4Q6UXC1 1216 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
SEC13-213ENST00000445064 ZHX1Q9UKY1 873 aaPredicted RBP18.36■□□□□ 0.53
SEC13-213ENST00000445064 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
SEC13-213ENST00000445064 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
SEC13-213ENST00000445064 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 LAMA3Q16787 3333 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 SYNGAP1Q96PV0 1343 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
SEC13-213ENST00000445064 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 FOXP2O15409 715 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 ADAMTS4O75173 837 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 FAM161BQ96MY7 647 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 TACC3Q9Y6A5 838 aa18.35■□□□□ 0.53
SEC13-213ENST00000445064 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 DLL1O00548 723 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 MCCP23508 829 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 ITGB8P26012 769 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 ACLYP53396 1101 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
SEC13-213ENST00000445064 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
SEC13-213ENST00000445064 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 FGD4Q96M96 766 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 TSEN34Q9BSV6 310 aaKnown RBP18.34■□□□□ 0.53
SEC13-213ENST00000445064 HOMER2Q9NSB8 354 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.34■□□□□ 0.53
SEC13-213ENST00000445064 FBXO40Q9UH90 709 aa18.34■□□□□ 0.53
SEC13-213ENST00000445064 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
SEC13-213ENST00000445064 SYNRGQ9UMZ2 1314 aa18.33■□□□□ 0.53
SEC13-213ENST00000445064 TSPY2A6NKD2 308 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 PQBP1O60828 265 aaKnown RBP18.33■□□□□ 0.52
SEC13-213ENST00000445064 CLTBP09497 229 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 OAZ1P54368 228 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
SEC13-213ENST00000445064 CNTN2Q02246 1040 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.52
SEC13-213ENST00000445064 KCNA10Q16322 511 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 FAM109BQ6ICB4 259 aaPredicted RBP18.33■□□□□ 0.52
SEC13-213ENST00000445064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
SEC13-213ENST00000445064 KLHDC9Q8NEP7 349 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 IL17RBQ9NRM6 502 aa18.33■□□□□ 0.52
SEC13-213ENST00000445064 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms