RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NEDD4P46934 1319 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 SGPL1O95470 568 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 FCER1AP12319 257 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 ADORA2AP29274 412 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 CCDC178Q5BJE1 867 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 MAP3K21Q5TCX8 1036 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 TMEM47Q9BQJ4 181 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 TEX13BQ9BXU2 312 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 KRT23Q9C075 422 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 SLC38A10Q9HBR0 1119 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 SLC5A4Q9NY91 659 aa21.95■■□□□ 1.1
CCDC188-202ENST00000444532 ZNFX1Q9P2E3 1918 aaKnown RBP21.95■■□□□ 1.1
CCDC188-202ENST00000444532 TRIM32Q13049 653 aa21.94■■□□□ 1.1
CCDC188-202ENST00000444532 CCL14Q16627 93 aa21.94■■□□□ 1.1
CCDC188-202ENST00000444532 BMP2KLQ5H9B9 411 aa21.94■■□□□ 1.1
CCDC188-202ENST00000444532 IQCA1Q86XH1 822 aa21.94■■□□□ 1.1
CCDC188-202ENST00000444532 U2AF1L4Q8WU68 220 aaKnown RBP21.94■■□□□ 1.1
CCDC188-202ENST00000444532 DCAF4Q8WV16 495 aa21.94■■□□□ 1.1
CCDC188-202ENST00000444532 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC188-202ENST00000444532 ISY1Q9ULR0 285 aaKnown RBP21.94■■□□□ 1.1
CCDC188-202ENST00000444532 KDM4AO75164 1064 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 PRKAR2AP13861 404 aaKnown RBP21.93■■□□□ 1.1
CCDC188-202ENST00000444532 OAZ1P54368 228 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 PTH1RQ03431 593 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 DGKHQ86XP1 1220 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 NPLOC4Q8TAT6 608 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 SHISA4Q96DD7 197 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 DEFB118Q96PH6 123 aa21.93■■□□□ 1.1
CCDC188-202ENST00000444532 U3KPZ7 1027 aaPredicted RBP21.93■■□□□ 1.1
CCDC188-202ENST00000444532 B4E1Z4 1266 aa21.92■■□□□ 1.1
CCDC188-202ENST00000444532 CACNB2Q08289 660 aaPredicted RBP21.92■■□□□ 1.1
CCDC188-202ENST00000444532 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
CCDC188-202ENST00000444532 MFSD14CQ5VZR4 134 aa21.92■■□□□ 1.1
CCDC188-202ENST00000444532 SNRNP48Q6IEG0 339 aaKnown RBP21.92■■□□□ 1.1
CCDC188-202ENST00000444532 KCTD1Q719H9 257 aa21.92■■□□□ 1.1
CCDC188-202ENST00000444532 ZSWIM5Q9P217 1185 aa21.92■■□□□ 1.1
CCDC188-202ENST00000444532 COBLO75128 1261 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 CENPBP07199 599 aaPredicted RBP21.91■■□□□ 1.1
CCDC188-202ENST00000444532 KCTD2Q14681 263 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 OLFML2BQ68BL8 750 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 CPXCR1Q8N123 301 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 MAP4K1Q92918 833 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 CHMP4CQ96CF2 233 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 MMP19Q99542 508 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 ZKSCAN3Q9BRR0 538 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 CRISPLD2Q9H0B8 497 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 FLRT1Q9NZU1 646 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 MTMR7Q9Y216 660 aa21.91■■□□□ 1.1
CCDC188-202ENST00000444532 IGHA2P01877 340 aa21.9■■□□□ 1.1
CCDC188-202ENST00000444532 TFRCP02786 760 aaKnown RBP21.9■■□□□ 1.1
CCDC188-202ENST00000444532 CCDC96Q2M329 555 aa21.9■■□□□ 1.1
CCDC188-202ENST00000444532 KIAA1211Q6ZU35 1233 aa21.9■■□□□ 1.1
CCDC188-202ENST00000444532 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
CCDC188-202ENST00000444532 ZSCAN10Q96SZ4 725 aaPredicted RBP21.9■■□□□ 1.1
CCDC188-202ENST00000444532 RAVER2Q9HCJ3 691 aaKnown RBP21.9■■□□□ 1.1
CCDC188-202ENST00000444532 CYP21A2P08686 494 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 TRDNQ13061 729 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 BTNL9Q6UXG8 535 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCDC188-202ENST00000444532 PRR12Q9ULL5 1215 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 DIS3Q9Y2L1 958 aaKnown RBP21.89■■□□□ 1.09
CCDC188-202ENST00000444532 RIPK3Q9Y572 518 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 BRCA2P51587 3418 aa21.89■■□□□ 1.09
CCDC188-202ENST00000444532 PDHBP11177 359 aa21.88■■□□□ 1.09
CCDC188-202ENST00000444532 CHST13Q8NET6 341 aa21.88■■□□□ 1.09
CCDC188-202ENST00000444532 ESYT1Q9BSJ8 1104 aa21.88■■□□□ 1.09
CCDC188-202ENST00000444532 FBXO40Q9UH90 709 aa21.88■■□□□ 1.09
CCDC188-202ENST00000444532 SNHG28P0DPA3 235 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 SLC4A3P48751 1232 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 RASGRP2Q7LDG7 609 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 UBE2Q1Q7Z7E8 422 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 MAML3Q96JK9 1138 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 UBAC1Q9BSL1 405 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 KAT14Q9H8E8 782 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 PLXNA1Q9UIW2 1896 aa21.87■■□□□ 1.09
CCDC188-202ENST00000444532 CYP2C19P33261 490 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 ZNF543Q08ER8 600 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 TKFCQ3LXA3 575 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 ERICH6BQ5W0A0 696 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 ENAHQ8N8S7 591 aaPredicted RBP21.86■■□□□ 1.09
CCDC188-202ENST00000444532 ANKLE1Q8NAG6 615 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 PNMA1Q8ND90 353 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 DDX11Q96FC9 970 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 GPCPD1Q9NPB8 672 aa21.86■■□□□ 1.09
CCDC188-202ENST00000444532 RBM8AQ9Y5S9 174 aaKnown RBP21.86■■□□□ 1.09
CCDC188-202ENST00000444532 ZNF536O15090 1300 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 TNKSO95271 1327 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 FRMPD2Q68DX3 1309 aaPredicted RBP21.85■■□□□ 1.09
CCDC188-202ENST00000444532 FARP2O94887 1054 aaPredicted RBP21.85■■□□□ 1.09
CCDC188-202ENST00000444532 PGK2P07205 417 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 CCND3P30281 292 aaPredicted RBP21.85■■□□□ 1.09
CCDC188-202ENST00000444532 ZNF792Q3KQV3 632 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
CCDC188-202ENST00000444532 SYDE2Q5VT97 1194 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 TTBK2Q6IQ55 1244 aa21.85■■□□□ 1.09
CCDC188-202ENST00000444532 LSG1Q9H089 658 aaKnown RBP21.85■■□□□ 1.09
CCDC188-202ENST00000444532 OGDHLQ9ULD0 1010 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms