RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 DIS3LQ8TF46 1054 aaKnown RBP16.17■□□□□ 0.18
AP001062.3-202ENST00000444409 PAWRQ96IZ0 340 aaKnown RBP16.17■□□□□ 0.18
AP001062.3-202ENST00000444409 SLC1A4P43007 532 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 AKNAD1Q5T1N1 836 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 SNRNP48Q6IEG0 339 aaKnown RBP16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 STAG1Q8WVM7 1258 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 DPF3Q92784 378 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 KIFC2Q96AC6 838 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 MMP19Q99542 508 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 SLC38A10Q9HBR0 1119 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
AP001062.3-202ENST00000444409 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 ZBED4O75132 1171 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 CYBAP13498 195 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 MCCP23508 829 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 STAT2P52630 851 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 OAZ1P54368 228 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 KCTD2Q14681 263 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 TRPV1Q8NER1 839 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 MAML3Q96JK9 1138 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
AP001062.3-202ENST00000444409 H0YGN5 161 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 ZNF213O14771 459 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 MSCO60682 206 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 PLA2G6O60733 806 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 FDX1P10109 184 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 RNF41Q9H4P4 317 aaPredicted RBP16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 DIS3Q9Y2L1 958 aaKnown RBP16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
AP001062.3-202ENST00000444409 LAMA4Q16363 1823 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 PGK2P07205 417 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 NT5C2P49902 561 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 ZNF792Q3KQV3 632 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 RCSD1Q6JBY9 416 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 CPXCR1Q8N123 301 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 IL25Q9H293 177 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 ZNFX1Q9P2E3 1918 aaKnown RBP16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 NEDD4P46934 1319 aa16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 RANBP2P49792 3224 aaKnown RBP16.13■□□□□ 0.17
AP001062.3-202ENST00000444409 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 CNGA1P29973 690 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 KCTD1Q719H9 257 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 RASGRP2Q7LDG7 609 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 ESR2Q92731 530 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 TTC14Q96N46 770 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 TMEM47Q9BQJ4 181 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 C11orf49Q9H6J7 331 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 RAD50Q92878 1312 aa16.12■□□□□ 0.17
AP001062.3-202ENST00000444409 DNAH12Q6ZR08 3092 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 DNAJC25-GNG10A0A024R161 153 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 COL6A1P12109 1028 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 CHST13Q8NET6 341 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 TINF2Q9BSI4 451 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 NRBP1Q9UHY1 535 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 PFASO15067 1338 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 ZNF536O15090 1300 aa16.11■□□□□ 0.17
AP001062.3-202ENST00000444409 SEPT4O43236 478 aa16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 EVI5O60447 810 aa16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 IMMTQ16891 758 aaKnown RBP16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 PLXNA1Q9UIW2 1896 aa16.1■□□□□ 0.17
AP001062.3-202ENST00000444409 ALPK3Q96L96 1907 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 CHMLP26374 656 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 PRAMEF19Q5SWL8 479 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 MSL3Q8N5Y2 521 aaKnown RBP16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 DDX11Q96FC9 970 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
AP001062.3-202ENST00000444409 KDM4AO75164 1064 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 SNHG28P0DPA3 235 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 PDHBP11177 359 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 MAMDC4Q6UXC1 1216 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 DGKHQ86XP1 1220 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 ANKRD35Q8N283 1001 aa16.08■□□□□ 0.16
AP001062.3-202ENST00000444409 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms