RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZRSR1Q15695 479 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 STX1AQ16623 288 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 AOC3Q16853 763 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DOK7Q18PE1 504 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 ABCB5Q2M3G0 1257 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SUPT20HL1Q3ZLR7 823 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CFAP100Q494V2 611 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 FAM47AQ5JRC9 791 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 XRRA1Q6P2D8 792 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DTHD1Q6ZMT9 781 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 KRBA2Q6ZNG9 492 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 NIPA1Q7RTP0 329 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SH3RF1Q7Z6J0 888 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DEFB132Q7Z7B7 95 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 FERMT3Q86UX7 667 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 KIAA0825Q8IV33 1275 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CCAR1Q8IX12 1150 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CEP57L1Q8IYX8 460 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 REXO1Q8N1G1 1221 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 IGSF22Q8N9C0 903 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 FSIP1Q8NA03 581 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 IQUBQ8NA54 791 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 RBM46Q8TBY0 533 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 NUP133Q8WUM0 1156 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CUL5Q93034 780 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 MRFAP1L1Q96HT8 127 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 PRMT6Q96LA8 375 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 C12orf42Q96LP6 360 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 FAM20AQ96MK3 541 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 MBOAT7Q96N66 472 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CSRNP1Q96S65 589 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SDF4Q9BRK5 362 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 ZKSCAN3Q9BRR0 538 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 LARP6Q9BRS8 491 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 WDR18Q9BV38 432 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 AMNQ9BXJ7 453 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 KIAA1683Q9H0B3 1180 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 NT5C3AQ9H0P0 336 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 VCPKMTQ9H867 229 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DBNDD1Q9H9R9 158 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SENP2Q9HC62 589 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SPON1Q9HCB6 807 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 MYOZ2Q9NPC6 264 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 DDX4Q9NQI0 724 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 GPHNQ9NQX3 736 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 RMND1Q9NWS8 449 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 IMPACTQ9P2X3 320 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 TFIP11Q9UBB9 837 aaKnown RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 ZNF70Q9UC06 446 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 STK17AQ9UEE5 414 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 CCDC39Q9UFE4 941 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 FBXO2Q9UK22 296 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 KCNH3Q9ULD8 1083 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 NAP1L2Q9ULW6 460 aaPredicted RBP3.22□□□□□ -1.89
LINC00393-201ENST00000443621 LOXHD1Q8IVV2 1947 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SBF1O95248 1867 aa3.22□□□□□ -1.89
LINC00393-201ENST00000443621 SCN4AP35499 1836 aa3.21□□□□□ -1.89
LINC00393-201ENST00000443621 SMCO2A6NFE2 343 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 DDTLA6NHG4 134 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 LRRC10BA6NIK2 292 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KIF28PB7ZC32 967 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 F5H6K3 240 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 H7C1D1 291 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NFKBIEO00221 500 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ATP2A1O14983 1001 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 WDR46O15213 610 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 PRDM1O75626 825 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 STAM2O75886 525 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KIF20AO95235 890 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 PLEKHA8P1O95397 391 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 CYP2D6P10635 497 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 BCRP11274 1271 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 BMP3P12645 472 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 EEF2P13639 858 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 AKR1B1P15121 316 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 LIG1P18858 919 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 GUCY1A2P33402 732 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ABCD1P33897 745 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 SLC1A4P43007 532 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF165P49910 485 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 STAT2P52630 851 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 RBM5P52756 815 aaKnown RBP eCLIP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TERF1P54274 439 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NAPAP54920 295 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NLRP12P59046 1061 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 MDM2Q00987 491 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 ICA1Q05084 483 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TYRO3Q06418 890 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 KLRC3Q07444 240 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NFIAQ12857 509 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 PSMD2Q13200 908 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 PTGDRQ13258 359 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NONOQ15233 471 aaKnown RBP eCLIP3.21□□□□□ -1.95e-6■□□□□ 8.7
LINC00393-201ENST00000443621 Q4G0T1 1027 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 TTC38Q5R3I4 469 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 NOL9Q5SY16 702 aaKnown RBP3.21□□□□□ -1.9
LINC00393-201ENST00000443621 HYIQ5T013 277 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 MSL1Q68DK7 614 aa3.21□□□□□ -1.9
LINC00393-201ENST00000443621 SHC4Q6S5L8 630 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms