RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 XPNPEP3Q9NQH7 507 aa13.99□□□□□ -0.17
TTC28-203ENST00000442232 MTMR4Q9NYA4 1195 aa13.99□□□□□ -0.17
TTC28-203ENST00000442232 ATP11BQ9Y2G3 1177 aa13.99□□□□□ -0.17
TTC28-203ENST00000442232 IGKV6D-41A0A0C4DH26 115 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 BMP3P12645 472 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
TTC28-203ENST00000442232 ZNF792Q3KQV3 632 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 RNF180Q86T96 592 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 REPS2Q8NFH8 660 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 MKL1Q969V6 931 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 EVI5LQ96CN4 794 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 LRCH3Q96II8 777 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 FBXO40Q9UH90 709 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 SMCHD1A6NHR9 2005 aa13.98□□□□□ -0.17
TTC28-203ENST00000442232 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 SOX1O00570 391 aaPredicted RBP13.97□□□□□ -0.17
TTC28-203ENST00000442232 FDX1P10109 184 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 AKR1A1P14550 325 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 TFAP4Q01664 338 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 LRRC41Q15345 812 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 LRIT3Q3SXY7 679 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 FAM47AQ5JRC9 791 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 ANKRD35Q8N283 1001 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
TTC28-203ENST00000442232 PRDM5Q9NQX1 630 aaPredicted RBP13.97□□□□□ -0.17
TTC28-203ENST00000442232 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
TTC28-203ENST00000442232 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 ATP2A1O14983 1001 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 SLC1A4P43007 532 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 STAT2P52630 851 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 OAZ1P54368 228 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
TTC28-203ENST00000442232 AAMPQ13685 434 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 GPR153Q6NV75 609 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 FAM160B2Q86V87 743 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 CHST13Q8NET6 341 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 CHURC1Q8WUH1 139 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
TTC28-203ENST00000442232 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
TTC28-203ENST00000442232 RAVER2Q9HCJ3 691 aaKnown RBP13.96□□□□□ -0.17
TTC28-203ENST00000442232 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
TTC28-203ENST00000442232 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 CTDSPL2Q05D32 466 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 GMCL1Q96IK5 515 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 TOMM22Q9NS69 142 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
TTC28-203ENST00000442232 MCM3APO60318 1980 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
TTC28-203ENST00000442232 PDE1AP54750 535 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 SPC25Q9HBM1 224 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 PHF24Q9UPV7 400 aa13.94□□□□□ -0.18
TTC28-203ENST00000442232 SZT2Q5T011 3432 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 PGK1P00558 417 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 TAL1P17542 331 aaPredicted RBP13.93□□□□□ -0.18
TTC28-203ENST00000442232 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
TTC28-203ENST00000442232 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
TTC28-203ENST00000442232 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 DEFB123Q8N688 67 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 STAG1Q8WVM7 1258 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
TTC28-203ENST00000442232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
TTC28-203ENST00000442232 RIPK3Q9Y572 518 aa13.93□□□□□ -0.18
TTC28-203ENST00000442232 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 DNAJC25-GNG10A0A024R161 153 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 ZNF865P0CJ78 1059 aaPredicted RBP13.92□□□□□ -0.18
TTC28-203ENST00000442232 MCCP23508 829 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 SNX17Q15036 470 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
TTC28-203ENST00000442232 C1orf53Q5VUE5 145 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
TTC28-203ENST00000442232 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 TSEN34Q9BSV6 310 aaKnown RBP13.92□□□□□ -0.18
TTC28-203ENST00000442232 RNF146Q9NTX7 359 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
TTC28-203ENST00000442232 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
TTC28-203ENST00000442232 SYNRGQ9UMZ2 1314 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 A0A1W2PQ45 241 aaPredicted RBP13.91□□□□□ -0.18
TTC28-203ENST00000442232 A0A1W2PQY0 241 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms