RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
SYN3-204ENST00000441821 BCAR3O75815 825 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 SNAI1O95863 264 aaPredicted RBP12.09□□□□□ -0.47
SYN3-204ENST00000441821 ASGR1P07306 291 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 AKR1B1P15121 316 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 FAM126BQ8IXS8 530 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 REPS2Q8NFH8 660 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 MTIF3Q9H2K0 278 aaKnown RBP12.09□□□□□ -0.47
SYN3-204ENST00000441821 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 FBXO28Q9NVF7 368 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
SYN3-204ENST00000441821 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 TLR3O15455 904 aaKnown RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 C6orf222P0C671 652 aaPredicted RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 CYP2D6P10635 497 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 PDE6AP16499 860 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 GJA9P57773 515 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 AAK1Q2M2I8 961 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 SLC9C2Q5TAH2 1124 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 VTI1AQ96AJ9 217 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 PPP1R12CQ9BZL4 782 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 NKX2-4Q9H2Z4 354 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
SYN3-204ENST00000441821 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
SYN3-204ENST00000441821 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 APBB1O00213 710 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 CD4P01730 458 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 FGBP02675 491 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
SYN3-204ENST00000441821 CYP2C18P33260 490 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 ACVR2BQ13705 512 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
SYN3-204ENST00000441821 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 NECAB3Q96P71 396 aaPredicted RBP12.07□□□□□ -0.48
SYN3-204ENST00000441821 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
SYN3-204ENST00000441821 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
SYN3-204ENST00000441821 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 ADCY6O43306 1168 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 NKX3-2P78367 333 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
SYN3-204ENST00000441821 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 LCORLQ8N3X6 602 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
SYN3-204ENST00000441821 ZNF532Q9HCE3 1301 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 NCOR1O75376 2440 aa12.06□□□□□ -0.48
SYN3-204ENST00000441821 MYH8P13535 1937 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 ERC2O15083 957 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 CDK8P49336 464 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 TFF2Q03403 129 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 CCDC144BQ3MJ40 725 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 C12orf60Q5U649 245 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 SNRNP48Q6IEG0 339 aaKnown RBP12.05□□□□□ -0.48
SYN3-204ENST00000441821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYN3-204ENST00000441821 AACSQ86V21 672 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 SLC43A3Q8NBI5 491 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 LRFN3Q9BTN0 628 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 HCN4Q9Y3Q4 1203 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
SYN3-204ENST00000441821 GBF1Q92538 1859 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 ATP2A1O14983 1001 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 CTAGE5O15320 804 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
SYN3-204ENST00000441821 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 C16orf86Q6ZW13 317 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 OTOP2Q7RTS6 562 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 ERC1Q8IUD2 1116 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 SEZ6LQ9BYH1 1024 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 HIPK3Q9H422 1215 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 PCDHA11Q9Y5I1 949 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
SYN3-204ENST00000441821 TCF20Q9UGU0 1960 aaKnown RBP12.03□□□□□ -0.48
SYN3-204ENST00000441821 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 RAD21O60216 631 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 CABYRO75952 493 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 KCNQ1P51787 676 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 RABGGTBP53611 331 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 ZKSCAN2Q63HK3 967 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 AMOTL1Q8IY63 956 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 RPUSD2Q8IZ73 545 aaKnown RBP12.03□□□□□ -0.48
SYN3-204ENST00000441821 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 PRPF38AQ8NAV1 312 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms