RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GDAQ9Y2T3 454 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 TRIM49BA6NDI0 452 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 IDEP14735 1019 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 WTAPQ15007 396 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 FAM184BQ9ULE4 1060 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 MATR3P43243 847 aaKnown RBP eCLIP22.72■■□□□ 1.23
SHOX2-203ENST00000441443 SPAG1Q07617 926 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 IFNL3Q8IZI9 196 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 DMGDHQ9UI17 866 aaKnown RBP22.72■■□□□ 1.23
SHOX2-203ENST00000441443 SLC7A5Q01650 507 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 TSR1Q2NL82 804 aaKnown RBP22.72■■□□□ 1.23
SHOX2-203ENST00000441443 AENQ8WTP8 325 aaKnown RBP22.72■■□□□ 1.23
SHOX2-203ENST00000441443 RPGRIP1Q96KN7 1286 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 CXorf56Q9H5V9 222 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 IQSEC3Q9UPP2 1182 aaPredicted RBP22.72■■□□□ 1.23
SHOX2-203ENST00000441443 CAPN7Q9Y6W3 813 aa22.72■■□□□ 1.23
SHOX2-203ENST00000441443 MTRQ99707 1265 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 TJP1Q07157 1748 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 KRT86O43790 486 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 MAP2K2P36507 400 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 CYP27A1Q02318 531 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 MFSD6Q6ZSS7 791 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 ARL8AQ96BM9 186 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 LRRC1Q9BTT6 524 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 GSCP56915 257 aaPredicted RBP22.71■■□□□ 1.23
SHOX2-203ENST00000441443 PDCLQ13371 301 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 UBE3CQ15386 1083 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 EEF2KMTQ96G04 330 aa22.71■■□□□ 1.23
SHOX2-203ENST00000441443 MYO1FO00160 1098 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 PARP1P09874 1014 aaKnown RBP22.7■■□□□ 1.22
SHOX2-203ENST00000441443 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 KCNQ4P56696 695 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 FANCBQ8NB91 859 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 ARMT1Q9H993 441 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 IRF2BP1Q8IU81 584 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 MB21D1Q8N884 522 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 SMCR8Q8TEV9 937 aaPredicted RBP22.7■■□□□ 1.22
SHOX2-203ENST00000441443 AGPAT5Q9NUQ2 364 aa22.7■■□□□ 1.22
SHOX2-203ENST00000441443 PRKAB2O43741 272 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 MBD4O95243 580 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 DNAJC7Q99615 494 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 NUP188Q5SRE5 1749 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 NDUFAB1O14561 156 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 PDE8BO95263 885 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 PRCPP42785 496 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 ATP1A2P50993 1020 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 PSMB7Q99436 277 aa22.69■■□□□ 1.22
SHOX2-203ENST00000441443 PDE8AO60658 829 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 KRT83P78385 493 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 KCTD16Q68DU8 428 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 POTEDQ86YR6 584 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 SH2D3CQ8N5H7 860 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 TSEN2Q8NCE0 465 aaKnown RBP22.68■■□□□ 1.22
SHOX2-203ENST00000441443 PLA2G12BQ9BX93 195 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 SMARCAL1Q9NZC9 954 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 PATL2C9JE40 543 aaKnown RBP22.68■■□□□ 1.22
SHOX2-203ENST00000441443 H0YHG0 523 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 PTGDRQ13258 359 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 TTMPQ5BVD1 217 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 ZNF654Q8IZM8 581 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 SH3GL2Q99962 352 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 ERICH2A1L162 156 aa22.68■■□□□ 1.22
SHOX2-203ENST00000441443 MYH7P12883 1935 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 TOGARAM1Q9Y4F4 1720 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 ZEB2O60315 1214 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 PMS1P54277 932 aaKnown RBP22.67■■□□□ 1.22
SHOX2-203ENST00000441443 SUSD4Q5VX71 490 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 CCDC70Q6NSX1 233 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 FERMT2Q96AC1 680 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 RIC1Q4ADV7 1423 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 GOLGA8KD6RF30 607 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 KRT2P35908 639 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 KLK7P49862 253 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 SMIM5Q71RC9 77 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 EHBP1Q8NDI1 1231 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 KRT23Q9C075 422 aa22.67■■□□□ 1.22
SHOX2-203ENST00000441443 CCDC196A0A1B0GTZ2 297 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 DDB1Q16531 1140 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 GBP6Q6ZN66 633 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 MAGEB6Q8N7X4 407 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 SECISBP2LQ93073 1101 aaKnown RBP22.66■■□□□ 1.22
SHOX2-203ENST00000441443 CAPN11Q9UMQ6 739 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 BCL9O00512 1426 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 CHRM1P11229 460 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-203ENST00000441443 AMOTL1Q8IY63 956 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 CNPY4Q8N129 248 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 JPH2Q9BR39 696 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-203ENST00000441443 CNNM2Q9H8M5 875 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 NHEJ1Q9H9Q4 299 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-203ENST00000441443 EHD2Q9NZN4 543 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 ABCC12Q96J65 1359 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 USP8P40818 1118 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 ZNF658Q5TYW1 1059 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-203ENST00000441443 CREG2Q8IUH2 290 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 RUFY1Q96T51 708 aa22.66■■□□□ 1.22
SHOX2-203ENST00000441443 FBXO3Q9UK99 471 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms