RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZNF658Q5TYW1 1059 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-204ENST00000439977 DTHD1Q6ZMT9 781 aa15.28■□□□□ 0.04
HERPUD1-204ENST00000439977 ARPP21Q9UBL0 812 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-204ENST00000439977 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
HERPUD1-204ENST00000439977 ARAP2Q8WZ64 1704 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 ENC1O14682 589 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 TSPY3P0CV98 308 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 TSPY8P0CW00 308 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 TXLNAP40222 546 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 UBA7P41226 1012 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 ST5P78524 1137 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 MCM6Q14566 821 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 IRF2BP1Q8IU81 584 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 MAPKAPK5Q8IW41 473 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 LRRC15Q8TF66 581 aa15.27■□□□□ 0.04
HERPUD1-204ENST00000439977 GNPATO15228 680 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 ERCC3P19447 782 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 OAS2P29728 719 aaKnown RBP15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 SMC1AQ14683 1233 aaKnown RBP15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 RABGGTAQ92696 567 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 HPS3Q969F9 1004 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 PNKPQ96T60 521 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 DISC1Q9NRI5 854 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 NHSL1Q5SYE7 1610 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 TTC26A0AVF1 554 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 CTAGE9A4FU28 777 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 PARP1P09874 1014 aaKnown RBP15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 SRGAP1Q7Z6B7 1085 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 NAA15Q9BXJ9 866 aaKnown RBP15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 LIMA1Q9UHB6 759 aaKnown RBP15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 CDC23Q9UJX2 597 aa15.27■□□□□ 0.03
HERPUD1-204ENST00000439977 PCP11498 1178 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 NFIXQ14938 502 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 NCAPH2Q6IBW4 605 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 NEK11Q8NG66 645 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 MAD2L2Q9UI95 211 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 TRAPPC10P48553 1259 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 KLK7P49862 253 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 ANKZF1Q9H8Y5 726 aa15.26■□□□□ 0.03
HERPUD1-204ENST00000439977 LRRC10BA6NIK2 292 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 ZPR1O75312 459 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 CALML3P27482 149 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 LONP1P36776 959 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 TMTC1Q8IUR5 882 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 ZNF444Q8N0Y2 327 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 TRERF1Q96PN7 1200 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 HDAC6Q9UBN7 1215 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 MYH6P13533 1939 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 LDHBP07195 334 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 ARHGAP25P42331 645 aa15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-204ENST00000439977 MYH13Q9UKX3 1938 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 B4DLN1 442 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 SEMA3EO15041 775 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 CYP26C1Q6V0L0 522 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 PLCH1Q4KWH8 1693 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 ADSSL1Q8N142 457 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 REXO2Q9Y3B8 237 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-204ENST00000439977 CCNT1O60563 726 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SBK1Q52WX2 424 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 NOA1Q8NC60 698 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 RMND1Q9NWS8 449 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 EPN1Q9Y6I3 576 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 EP400Q96L91 3159 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TXNRD1Q16881 649 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 ARL6IP4Q66PJ3 421 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 MB21D1Q8N884 522 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 UIMC1Q96RL1 719 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 NAPGQ99747 312 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TTF2Q9UNY4 1162 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SPATA31A5Q5VU36 1347 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 ITIH6Q6UXX5 1313 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SPATA31A7Q8IWB4 1347 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 KLRF2D3W0D1 207 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 H3BQF6 201 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 NDUFA10O95299 355 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 FCER1AP12319 257 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TM4SF1P30408 202 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 TECP42680 631 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms