RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DIS3Q9Y2L1 958 aaKnown RBP24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 SEPT4O43236 478 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 ZBED4O75132 1171 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 FGRP09769 529 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 PRAMEF19Q5SWL8 479 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 SNRNP48Q6IEG0 339 aaKnown RBP24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 PLEKHM2Q8IWE5 1019 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 OSBPL3Q9H4L5 887 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 SLC38A10Q9HBR0 1119 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 IL17RBQ9NRM6 502 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 PCDH10Q9P2E7 1040 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 RIPK3Q9Y572 518 aa24.1■■□□□ 1.45
NCKIPSD-206ENST00000439518 DNM1LO00429 736 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 ORC4O43929 436 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 FGAP02671 866 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 BMP3P12645 472 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 NMIQ13287 307 aaPredicted RBP24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 LRRC26Q2I0M4 334 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 KIFC2Q96AC6 838 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 GMCL1Q96IK5 515 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 NRBP1Q9UHY1 535 aa24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 ZMYND8Q9ULU4 1186 aaPredicted RBP24.09■■□□□ 1.45
NCKIPSD-206ENST00000439518 TSPY2A6NKD2 308 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 TRIM6-TRIM34B2RNG4 842 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 PPP4R3BQ5MIZ7 849 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 ZNF589Q86UQ0 364 aaPredicted RBP24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 GDF15Q99988 308 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 TINF2Q9BSI4 451 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 DNAH12Q6ZR08 3092 aa24.08■■□□□ 1.45
NCKIPSD-206ENST00000439518 A0A1W2PPC1 479 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 HSPD1P10809 573 aaKnown RBP24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 NOVP48745 357 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 CPXCR1Q8N123 301 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 ARRDC4Q8NCT1 418 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 RILPL2Q969X0 211 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 RAVER2Q9HCJ3 691 aaKnown RBP24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 ZMYM6O95789 1325 aa24.07■■□□□ 1.44
NCKIPSD-206ENST00000439518 DNAJC25-GNG10A0A024R161 153 aa24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 NMT2O60551 498 aa24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 OAZ1P54368 228 aa24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 ANO1Q5XXA6 986 aa24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 SENP6Q9GZR1 1112 aaPredicted RBP24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 STX8Q9UNK0 236 aa24.06■■□□□ 1.44
NCKIPSD-206ENST00000439518 TMEM232C9JQI7 657 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 RANBP6O60518 1105 aaKnown RBP24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 FDX1P10109 184 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 SYN1P17600 705 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 MCCP23508 829 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 BMP8BP34820 402 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 GJC2Q5T442 439 aaPredicted RBP24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 CTDP1Q9Y5B0 961 aaPredicted RBP24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 CCDC171Q6TFL3 1326 aa24.05■■□□□ 1.44
NCKIPSD-206ENST00000439518 PLXNA1Q9UIW2 1896 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 PLA2G6O60733 806 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 SDSP20132 328 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 SLC1A4P43007 532 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 STAT2P52630 851 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 FAM160B2Q86V87 743 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 CHURC1Q8WUH1 139 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 STAG1Q8WVM7 1258 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 DDX11Q96FC9 970 aa24.04■■□□□ 1.44
NCKIPSD-206ENST00000439518 TAL1P17542 331 aaPredicted RBP24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 SLC4A3P48751 1232 aa24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 RCSD1Q6JBY9 416 aa24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 MSL3Q8N5Y2 521 aaKnown RBP24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 CHST13Q8NET6 341 aa24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 SUPT16HQ9Y5B9 1047 aaKnown RBP24.03■■□□□ 1.44
NCKIPSD-206ENST00000439518 SMCHD1A6NHR9 2005 aa24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 ZNF865P0CJ78 1059 aaPredicted RBP24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 MAGEA10P43363 369 aaPredicted RBP24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 MAMDC4Q6UXC1 1216 aa24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 FBXO40Q9UH90 709 aa24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 SZT2Q5T011 3432 aa24.02■■□□□ 1.44
NCKIPSD-206ENST00000439518 KBTBD13C9JR72 458 aa24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 LRRC41Q15345 812 aa24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 ZNF467Q7Z7K2 595 aaPredicted RBP24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 CHMP4CQ96CF2 233 aa24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 ISY1Q9ULR0 285 aaKnown RBP24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 ZNF536O15090 1300 aa24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 SYNGAP1Q96PV0 1343 aa24.01■■□□□ 1.43
NCKIPSD-206ENST00000439518 LAMA3Q16787 3333 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 ATN1P54259 1190 aaPredicted RBP24■■□□□ 1.43
NCKIPSD-206ENST00000439518 MFAP1P55081 439 aaKnown RBP24■■□□□ 1.43
NCKIPSD-206ENST00000439518 HAND2P61296 217 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 KCTD1Q719H9 257 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 RASGRP2Q7LDG7 609 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 ANKRD35Q8N283 1001 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 FGD4Q96M96 766 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 TOMM22Q9NS69 142 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 CNPY2Q9Y2B0 182 aa24■■□□□ 1.43
NCKIPSD-206ENST00000439518 SNAI1O95863 264 aaPredicted RBP23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 RARBP10826 455 aa23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 PCP11498 1178 aaKnown RBP23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 IKQ13123 557 aaPredicted RBP23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 RRP12Q5JTH9 1297 aaKnown RBP23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 XPNPEP3Q9NQH7 507 aa23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 PRR12Q9ULL5 1215 aa23.99■■□□□ 1.43
NCKIPSD-206ENST00000439518 AKR1A1P14550 325 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms