RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KCTD1Q719H9 257 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 DHX36Q9H2U1 1008 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CRKP46108 304 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 PPARDQ03181 441 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 C11orf57Q6ZUT1 292 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 PIGSQ96S52 555 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 TMEM47Q9BQJ4 181 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 TMEM232C9JQI7 657 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CHMP2AO43633 222 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CHRNA5P30532 468 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 TECP42680 631 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CHMP4BP1P59074 171 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 DYMQ7RTS9 669 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 CHURC1Q8WUH1 139 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 VPS16Q9H269 839 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
TRAPPC9-202ENST00000438773 UBXN1Q04323 297 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 CCDC181Q5TID7 509 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 MMRN2Q9H8L6 949 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 ZBTB21Q9ULJ3 1066 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 PCDHA4Q9UN74 947 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 SYNRGQ9UMZ2 1314 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 AOC3Q16853 763 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 SENP2Q9HC62 589 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
TRAPPC9-202ENST00000438773 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 CASQ1P31415 396 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 PAK1Q13153 545 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 COA7Q96BR5 231 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 AKR1B10O60218 316 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 ECE2O60344 883 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 SP4Q02446 784 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 HAUS3Q68CZ6 603 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 NSMFQ6X4W1 530 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 FBXO11Q86XK2 927 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 IPO4Q8TEX9 1081 aaKnown RBP12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 GOLGA6L9A6NEM1 432 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 ORC4O43929 436 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 CDC25AP30304 524 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 NT5C2P49902 561 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 RTKN2Q8IZC4 609 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 KRT222Q8N1A0 295 aa12.96□□□□□ -0.33
TRAPPC9-202ENST00000438773 FAM13AO94988 1023 aa12.96□□□□□ -0.34
TRAPPC9-202ENST00000438773 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.34
TRAPPC9-202ENST00000438773 TDRD7Q8NHU6 1098 aaKnown RBP12.96□□□□□ -0.34
TRAPPC9-202ENST00000438773 CEP95Q96GE4 821 aa12.96□□□□□ -0.34
TRAPPC9-202ENST00000438773 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC9-202ENST00000438773 USO1O60763 962 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 RCAN1P53805 252 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 CSGALNACT2Q8N6G5 542 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 TRAF5O00463 557 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 CNNM4Q6P4Q7 775 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 VPS36Q86VN1 386 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 SPAG5Q96R06 1193 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 CETN1Q12798 172 aa12.95□□□□□ -0.34
TRAPPC9-202ENST00000438773 HERC4Q5GLZ8 1057 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 LRRC8AQ8IWT6 810 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 IGSF22Q8N9C0 903 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 AMNQ9BXJ7 453 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 OGFRQ9NZT2 677 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 DAGLAQ9Y4D2 1042 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 LONP1P36776 959 aaKnown RBP12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 PRR16Q569H4 304 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 GRAMD1CQ8IYS0 662 aa12.94□□□□□ -0.34
TRAPPC9-202ENST00000438773 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms