RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 DDX11Q96FC9 970 aa10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 RIPK3Q9Y572 518 aa10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 LAMA3Q16787 3333 aa10.59□□□□□ -0.71
CTDSPL-205ENST00000436654 SALL3Q9BXA9 1300 aa10.58□□□□□ -0.71
CTDSPL-205ENST00000436654 FOXP2O15409 715 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 PGK1P00558 417 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 RARBP10826 455 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 BMP3P12645 472 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 VPS53Q5VIR6 699 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 NEDD1Q8NHV4 660 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 LBHD1Q9BQE6 289 aaPredicted RBP10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 PRKAG2Q9UGJ0 569 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 FEM1BQ9UK73 627 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 DIS3Q9Y2L1 958 aaKnown RBP10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 ZNF236Q9UL36 1845 aa10.58□□□□□ -0.72
CTDSPL-205ENST00000436654 BAZ2AQ9UIF9 1905 aaKnown RBP10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 TMEM232C9JQI7 657 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 ZNF865P0CJ78 1059 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 PDE1AP54750 535 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 IKQ13123 557 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 Q7L0L9 218 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 ANKRD35Q8N283 1001 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 GMCL1P1Q8NEA9 526 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 SLC38A10Q9HBR0 1119 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 HOMER2Q9NSB8 354 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 CNPY2Q9Y2B0 182 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 TACC3Q9Y6A5 838 aa10.57□□□□□ -0.72
CTDSPL-205ENST00000436654 RLFQ13129 1914 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 ALPK3Q96L96 1907 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 PLIN4Q96Q06 1357 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 TSPY2A6NKD2 308 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 ATP2A1O14983 1001 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 NMT2O60551 498 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 AKR1A1P14550 325 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 MCCP23508 829 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 SNAP25P60880 206 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 RASGRP2Q7LDG7 609 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 RNF180Q86T96 592 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 EVI5LQ96CN4 794 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 ZHX1Q9UKY1 873 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 SYNPO2Q9UMS6 1093 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 STX8Q9UNK0 236 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 PHF24Q9UPV7 400 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 STXBP5LQ9Y2K9 1186 aa10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.56□□□□□ -0.72
CTDSPL-205ENST00000436654 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 A0A0D9SFI3 127 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 RANBP6O60518 1105 aaKnown RBP10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 SNAI1O95863 264 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 SLC1A4P43007 532 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 STAT2P52630 851 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 TLE2Q04725 743 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 SNX17Q15036 470 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 CHST13Q8NET6 341 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 BADQ92934 168 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 LNPKQ9C0E8 428 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 TOMM22Q9NS69 142 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 FAM184BQ9ULE4 1060 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 SYNGAP1Q96PV0 1343 aa10.55□□□□□ -0.72
CTDSPL-205ENST00000436654 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 TRIM43BA6NCK2 446 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 CNTN2Q02246 1040 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 NMIQ13287 307 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 ACVR2BQ13705 512 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 MAMDC4Q6UXC1 1216 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 FAM160B2Q86V87 743 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 MSL3Q8N5Y2 521 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 TRIM43Q96BQ3 446 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 FGD4Q96M96 766 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 PDLIM7Q9NR12 457 aa10.54□□□□□ -0.72
CTDSPL-205ENST00000436654 HELLSQ9NRZ9 838 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms