RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.44
SCN4A-201ENST00000435607 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.44
SCN4A-201ENST00000435607 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.44
SCN4A-201ENST00000435607 GCP02774 474 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 USP14P54578 494 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 FAM89AQ96GI7 184 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 ARHGAP44Q17R89 818 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 CCDC38Q502W7 563 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 RNF217Q8TC41 542 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 AFAP1L1Q8TED9 768 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 TEKT2Q9UIF3 430 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
SCN4A-201ENST00000435607 THAP12O43422 761 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
SCN4A-201ENST00000435607 NUDT18Q6ZVK8 323 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 CABP7Q86V35 215 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 LRRIQ4A6NIV6 560 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.45
SCN4A-201ENST00000435607 TRIM37O94972 964 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 TBC1D7Q9P0N9 293 aa12.27□□□□□ -0.45
SCN4A-201ENST00000435607 IGBP1P78318 339 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 CERKLQ49MI3 558 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 MFSD14BQ5SR56 506 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 TRIM31Q9BZY9 425 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 ADGRF5Q8IZF2 1346 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 IFNB1P01574 187 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 RECQLP46063 649 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 BPIFB4P59827 614 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 PDE1CQ14123 709 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 PPP4R4Q6NUP7 873 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 FAM81BQ96LP2 452 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 SUCLA2Q9P2R7 463 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 GPC4O75487 556 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 PIK3CAP42336 1068 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 NOLC1Q14978 699 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 RAPH1Q70E73 1250 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 EIF2AQ9BY44 585 aaKnown RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 EPS15L1Q9UBC2 864 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 STX1BP61266 288 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 GTF2IP78347 998 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 BBOF1Q8ND07 529 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 RNASE9P60153 205 aaKnown RBP12.26□□□□□ -0.45
SCN4A-201ENST00000435607 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 RNF139Q8WU17 664 aa12.26□□□□□ -0.45
SCN4A-201ENST00000435607 EPHB1P54762 984 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
SCN4A-201ENST00000435607 LARSQ9P2J5 1176 aaKnown RBP12.25□□□□□ -0.45
SCN4A-201ENST00000435607 ZNF212Q9UDV6 495 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 K7ENM7 598 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 OCM2P0CE71 109 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 OCMP0CE72 109 aaPredicted RBP12.25□□□□□ -0.45
SCN4A-201ENST00000435607 MAGEA1P43355 309 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 MYLK4Q86YV6 388 aaPredicted RBP12.25□□□□□ -0.45
SCN4A-201ENST00000435607 TMTC1Q8IUR5 882 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 TEX12Q9BXU0 123 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 DPYSL4O14531 572 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 HOXD10P28358 340 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 POSTNQ15063 836 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 PPP2R3CQ969Q6 453 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 SAT1P21673 171 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 CASP2P42575 452 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 DYMQ7RTS9 669 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 FBXO11Q86XK2 927 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 LMNB2Q03252 620 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 ANO1Q5XXA6 986 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 CDHR1Q96JP9 859 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 TRIM45Q9H8W5 580 aaPredicted RBP12.25□□□□□ -0.45
SCN4A-201ENST00000435607 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 CYP2J2P51589 502 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 PTPN23Q9H3S7 1636 aa12.25□□□□□ -0.45
SCN4A-201ENST00000435607 ARHGAP42A6NI28 874 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 GNGT2O14610 69 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 FAM178BQ8IXR5 827 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
SCN4A-201ENST00000435607 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms