RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PLEKHA4Q9H4M7 779 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 ZSWIM4Q9H7M6 989 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 GGA3Q9NZ52 723 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 PUF60Q9UHX1 559 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 IRS2Q9Y4H2 1338 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 ECM29Q5VYK3 1845 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 PAPPA2Q9BXP8 1791 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 CCDC189A1A4V9 331 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 PHACTR2O75167 634 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 CCDC175P0C221 793 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 CMA1P23946 247 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 MNAT1P51948 309 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 HDLBPQ00341 1268 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 TNFAIP1Q13829 316 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 KARSQ15046 597 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 AACSQ86V21 672 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 FSD1Q9BTV5 496 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 SIL1Q9H173 461 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 GBA2Q9HCG7 927 aaPredicted RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 ATXN2Q99700 1313 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 RFX7Q2KHR2 1363 aa8.7□□□□□ -1.02
CNKSR3-202ENST00000433165 UNCXA6NJT0 531 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 SPTLC2O15270 562 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 STK38Q15208 465 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 SPECC1LQ69YQ0 1117 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 HELBQ8NG08 1087 aaPredicted RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 CLIC6Q96NY7 704 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 KCNQ5Q9NR82 932 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 SERPINA10Q9UK55 444 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 CLIC4Q9Y696 253 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 HMGB1P09429 215 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 PFKFB1P16118 471 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 TNNI2P48788 182 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 LIG3P49916 1009 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 NOGQ13253 232 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 WHAMMP3Q1A5X7 153 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 FBXO33Q7Z6M2 555 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 WDR66Q8TBY9 1149 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 DESI2Q9BSY9 194 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 FAM169AQ9Y6X4 670 aa8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 U3KPZ7 1027 aaPredicted RBP8.69□□□□□ -1.02
CNKSR3-202ENST00000433165 KIF5CO60282 957 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CYP21A2P08686 494 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 FOSBP53539 338 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 SF3A1Q15459 793 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 SAPCD2Q86UD0 394 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 VGLL2Q8N8G2 317 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 EAF2Q96CJ1 260 aaPredicted RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CAPNS2Q96L46 248 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 PANX2Q96RD6 677 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 MRIQ9BWK5 157 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 ZNF408Q9H9D4 720 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 FANCLQ9NW38 375 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 BCCIPQ9P287 314 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 KCNG1Q9UIX4 513 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 FAM237AA0A1B0GTK4 181 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTAGE15A4D2H0 777 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTAGE9A4FU28 777 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 TRAF5O00463 557 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 EBAG9O00559 213 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 RHOXF2BP0C7M4 288 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTAGE8P0CG41 777 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 TDO2P48775 406 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTCFP49711 727 aaPredicted RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 VEGFBP49765 207 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 ADKP55263 362 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 HTRA3P83110 453 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 MFSD14BQ5SR56 506 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 DHX32Q7L7V1 743 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 BRAPQ7Z569 592 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 KIAA0825Q8IV33 1275 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 IGSF22Q8N9C0 903 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 CDCA5Q96FF9 252 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 FAM84BQ96KN1 310 aaPredicted RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 RHOXF2Q9BQY4 288 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 NAA15Q9BXJ9 866 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 TMOD2Q9NZR1 351 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 HPCAL4Q9UM19 191 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 HPSEQ9Y251 543 aa8.68□□□□□ -1.02
CNKSR3-202ENST00000433165 MROH7-TTC4A0A0A0MT08 1334 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms