RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 MB21D1Q8N884 522 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 ZNF296Q8WUU4 475 aaPredicted RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 MAP3K14Q99558 947 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 KIF2CQ99661 725 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 NID2Q14112 1375 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
CSTF3-202ENST00000431742 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 VWA5AO00534 786 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 PEX10O60683 326 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 FKTNO75072 461 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 PARP1P09874 1014 aaKnown RBP16.81■□□□□ 0.28
CSTF3-202ENST00000431742 LBX1P52954 281 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 ERVK-9P63128 1117 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 ERVK-24P63145 666 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 SP3Q02447 781 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 APOA5Q6Q788 366 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
CSTF3-202ENST00000431742 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 RCAN1P53805 252 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 EVCP57679 992 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 CAP1Q01518 475 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
CSTF3-202ENST00000431742 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 KIFC2Q96AC6 838 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 PAGR1Q9BTK6 254 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 ALDH8A1Q9H2A2 487 aaPredicted RBP16.8■□□□□ 0.28
CSTF3-202ENST00000431742 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
CSTF3-202ENST00000431742 SLC38A10Q9HBR0 1119 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
CSTF3-202ENST00000431742 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
CSTF3-202ENST00000431742 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
CSTF3-202ENST00000431742 FDX1P10109 184 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 SLC16A2P36021 539 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 LACTBP83111 547 aaPredicted RBP16.79■□□□□ 0.28
CSTF3-202ENST00000431742 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 Q3C1V9 767 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 GPRC5AQ8NFJ5 357 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 BRF1Q92994 677 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 RANBP17Q9H2T7 1088 aaKnown RBP16.79■□□□□ 0.28
CSTF3-202ENST00000431742 PLXNA1Q9UIW2 1896 aa16.79■□□□□ 0.28
CSTF3-202ENST00000431742 KLF18A0A0U1RQI7 1052 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 CALM1P0DP23 149 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 CALM2P0DP24 149 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 CALM3P0DP25 149 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 CTGFP29279 349 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 APOBRQ0VD83 1088 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
CSTF3-202ENST00000431742 SLC35G1Q2M3R5 365 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
CSTF3-202ENST00000431742 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 SPATC1LQ9H0A9 340 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 CPVLQ9H3G5 476 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 PRDM10Q9NQV6 1147 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 LCTP09848 1927 aa16.78■□□□□ 0.28
CSTF3-202ENST00000431742 ZNF536O15090 1300 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 KLRF2D3W0D1 207 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 RXRAP19793 462 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 OAZ1P54368 228 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 FGD1P98174 961 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.28
CSTF3-202ENST00000431742 CD99L2Q8TCZ2 262 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 ARHGAP39Q9C0H5 1083 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 PORCNQ9H237 461 aa16.77■□□□□ 0.28
CSTF3-202ENST00000431742 ZBTB43O43298 467 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 ZBED4O75132 1171 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 KIF5BP33176 963 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 CCNA1P78396 465 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 RIOX2Q8IUF8 465 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
CSTF3-202ENST00000431742 TEX13BQ9BXU2 312 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
CSTF3-202ENST00000431742 GOLGA8BA8MQT2 603 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 CYTH3O43739 400 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 SMARCA1P28370 1054 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
CSTF3-202ENST00000431742 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms