RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ATP2C1P98194 919 aaPredicted RBP14.62□□□□□ -0.07
DDX56-204ENST00000431640 HDLBPQ00341 1268 aaKnown RBP14.62□□□□□ -0.07
DDX56-204ENST00000431640 MYL5Q02045 173 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 CDC42EP5Q6NZY7 148 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 MICALL2Q8IY33 904 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
DDX56-204ENST00000431640 SERTAD1Q9UHV2 236 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 A0A087WWV3 80 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
DDX56-204ENST00000431640 SARSP49591 514 aaKnown RBP14.61□□□□□ -0.07
DDX56-204ENST00000431640 NFIAQ12857 509 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 NCAPHQ15003 741 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 ARL6IP4Q66PJ3 421 aaKnown RBP14.61□□□□□ -0.07
DDX56-204ENST00000431640 LRRC8AQ8IWT6 810 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 GPC2Q8N158 579 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 TRPM4Q8TD43 1214 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 CCDC12Q8WUD4 166 aaPredicted RBP14.61□□□□□ -0.07
DDX56-204ENST00000431640 MRIQ9BWK5 157 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 NRBP1Q9UHY1 535 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 MYH1P12882 1939 aa14.61□□□□□ -0.07
DDX56-204ENST00000431640 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 RPS12P25398 132 aaKnown RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 NOVP48745 357 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 GRIN1Q05586 938 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 ZNF174Q15697 407 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 EARS2Q5JPH6 523 aaKnown RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 SAMD7Q7Z3H4 446 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 FOXP4Q8IVH2 680 aaPredicted RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 PRIMPOLQ96LW4 560 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 SPZ1Q9BXG8 430 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 TDRD3Q9H7E2 651 aaKnown RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 PYCARDQ9ULZ3 195 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 WDR90Q96KV7 1748 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 PARP1P09874 1014 aaKnown RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 EPS15P42566 896 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 PTGDRQ13258 359 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 NBPF9Q3BBW0 867 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 PIK3AP1Q6ZUJ8 805 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 STAG2Q8N3U4 1231 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 DPF2Q92785 391 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 OSBPL5Q9H0X9 879 aaPredicted RBP14.6□□□□□ -0.07
DDX56-204ENST00000431640 MYOZ2Q9NPC6 264 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 BARHL2Q9NY43 387 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 SWAP70Q9UH65 585 aa14.6□□□□□ -0.07
DDX56-204ENST00000431640 CCDC194A0A1B0GVG4 234 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 KLRF2D3W0D1 207 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 WNT10BO00744 389 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 NRDCO43847 1150 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.07
DDX56-204ENST00000431640 MORC3Q14149 939 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 TBC1D10BQ4KMP7 808 aaPredicted RBP14.59□□□□□ -0.07
DDX56-204ENST00000431640 PPP4R3BQ5MIZ7 849 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 ISM2Q6H9L7 571 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 ZFPM1Q8IX07 1006 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 MTMR14Q8NCE2 650 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 SLC44A5Q8NCS7 719 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 SPATA20Q8TB22 786 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 CACTINQ8WUQ7 758 aaKnown RBP14.59□□□□□ -0.07
DDX56-204ENST00000431640 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 CNOT7Q9UIV1 285 aaKnown RBP14.59□□□□□ -0.07
DDX56-204ENST00000431640 MAN1B1Q9UKM7 699 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
DDX56-204ENST00000431640 CNTNAP1P78357 1384 aa14.59□□□□□ -0.07
DDX56-204ENST00000431640 LAD1O00515 517 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 SLURP2P0DP57 97 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 LONP1P36776 959 aaKnown RBP14.58□□□□□ -0.08
DDX56-204ENST00000431640 FANCCQ00597 558 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 IQUBQ8NA54 791 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 SYMPKQ92797 1274 aaKnown RBP14.58□□□□□ -0.08
DDX56-204ENST00000431640 XPO4Q9C0E2 1151 aaKnown RBP14.58□□□□□ -0.08
DDX56-204ENST00000431640 IFNKQ9P0W0 207 aa14.58□□□□□ -0.08
DDX56-204ENST00000431640 POTECB2RU33 542 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 hCG_1984214I3L0E3 225 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 GNA11P29992 359 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 HIRAP54198 1017 aaPredicted RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 PICALMQ13492 652 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 DLGAP5Q15398 846 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 SH3RF1Q7Z6J0 888 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 CDAN1Q8IWY9 1227 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 PDILTQ8N807 584 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 ZNF713Q8N859 430 aaPredicted RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 CCDC150Q8NCX0 1101 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 ENOX1Q8TC92 643 aaKnown RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 DHX58Q96C10 678 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms