RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PPM1GO15355 546 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM87AP0C7U9 286 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 CYP7A1P22680 504 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 CTSKP43235 329 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 SUMO1P63165 101 aaKnown RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 NTRK3Q16288 839 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 SLC35F1Q5T1Q4 408 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 SFRP5Q5T4F7 317 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 GTF2IRD2BQ6EKJ0 949 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 POMZP3Q6PJE2 187 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 GTF2IRD2Q86UP8 949 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 NIM1KQ8IY84 436 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 SHISA5Q8N114 240 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 CRACR2BQ8N4Y2 399 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 KREMEN2Q8NCW0 462 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 ZCRB1Q8TBF4 217 aaKnown RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 PIWIL2Q8TC59 973 aaKnown RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 ENOX1Q8TC92 643 aaKnown RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 BTN2A2Q8WVV5 523 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 MCMBPQ9BTE3 642 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 GPR62Q9BZJ7 368 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 C7orf69Q9H7B7 122 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 LGR6Q9HBX8 967 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRDM5Q9NQX1 630 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 INTS7Q9NVH2 962 aaKnown RBP4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 GFOD1Q9NXC2 390 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 AKT3Q9Y243 479 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 U3KQE9 123 aa4.55□□□□□ -1.68
HMGB1P27-201ENST00000431429 GSG1L2A8MUP6 293 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRODHO43272 600 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRAMEF1O95521 474 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 POU3F2P20265 443 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 HOXC12P31275 282 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 STAT3P40763 770 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 TNK2Q07912 1038 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 SF1Q15637 639 aaKnown RBP4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 NFKBIBQ15653 356 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 DENND5AQ6IQ26 1287 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 NSMFQ6X4W1 530 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 PRR23CQ6ZRP0 262 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 RNF180Q86T96 592 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 FIBCD1Q8N539 461 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 ADCY4Q8NFM4 1077 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 GIMAP7Q8NHV1 300 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 SLC7A14Q8TBB6 771 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 COPS5Q92905 334 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 BRF1Q92994 677 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 CCDC140Q96MF4 163 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 IER2Q9BTL4 223 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 DUSP15Q9H1R2 295 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 MKNK2Q9HBH9 465 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 CYP26B1Q9NR63 512 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 RAXQ9Y2V3 346 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 ST14Q9Y5Y6 855 aa4.54□□□□□ -1.68
HMGB1P27-201ENST00000431429 HMX2A2RU54 273 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 H0Y8X5 98 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NOP56O00567 594 aaKnown RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 DNAJC8O75937 253 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 RAPGEF3O95398 923 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 SDSP20132 328 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 RXRBP28702 533 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 OXCT1P55809 520 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NMIQ13287 307 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NKPD1Q17RQ9 610 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 TAF7LQ5H9L4 462 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 ADAT2Q7Z6V5 191 aaKnown RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 DAGLBQ8NCG7 672 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NPLOC4Q8TAT6 608 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 STAG1Q8WVM7 1258 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 CDC6Q99741 560 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NOL6Q9H6R4 1146 aaKnown RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 CHST7Q9NS84 486 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 GTF2IRD1Q9UHL9 959 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 KCNH3Q9ULD8 1083 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 TPX2Q9ULW0 747 aaKnown RBP4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 SUGT1Q9Y2Z0 365 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 NPFFR2Q9Y5X5 522 aa4.53□□□□□ -1.68
HMGB1P27-201ENST00000431429 hCG_2014768A0A024R1R8 64 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 FAM170BA6NMN3 283 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 RNF225M0QZC1 329 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 ARNTLO00327 626 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 AURKAO14965 403 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 KCNH1O95259 989 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 F13BP05160 661 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 GSNP06396 782 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 IGBP1P78318 339 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 GABREP78334 506 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 GAB4Q2WGN9 574 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 ACBD5Q5T8D3 534 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 RNF43Q68DV7 783 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 MFSD4AQ8N468 514 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 TMEM145Q8NBT3 493 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 SCLYQ96I15 445 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 TBC1D32Q96NH3 1257 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 KCNF1Q9H3M0 494 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms