RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 LENG1Q96BZ8 264 aaPredicted RBP19.37■□□□□ 0.69
PTPRA-206ENST00000430705 FGD4Q96M96 766 aa19.37■□□□□ 0.69
PTPRA-206ENST00000430705 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
PTPRA-206ENST00000430705 TINF2Q9BSI4 451 aa19.37■□□□□ 0.69
PTPRA-206ENST00000430705 SLC38A10Q9HBR0 1119 aa19.37■□□□□ 0.69
PTPRA-206ENST00000430705 SLC5A4Q9NY91 659 aa19.37■□□□□ 0.69
PTPRA-206ENST00000430705 SYNPO2Q9UMS6 1093 aa19.37■□□□□ 0.69
PTPRA-206ENST00000430705 DNAJC25-GNG10A0A024R161 153 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 NMT2O60551 498 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 ZNF865P0CJ78 1059 aaPredicted RBP19.36■□□□□ 0.69
PTPRA-206ENST00000430705 TSPY3P0CV98 308 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 TSPY8P0CW00 308 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 COPB2P35606 906 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 PDE4BQ07343 736 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.36■□□□□ 0.69
PTPRA-206ENST00000430705 PRPF38AQ8NAV1 312 aaKnown RBP19.36■□□□□ 0.69
PTPRA-206ENST00000430705 KIFC2Q96AC6 838 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 EVI5LQ96CN4 794 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 FAM227BQ96M60 508 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 ZNF287Q9HBT7 754 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 IL17RBQ9NRM6 502 aa19.36■□□□□ 0.69
PTPRA-206ENST00000430705 DIS3Q9Y2L1 958 aaKnown RBP19.36■□□□□ 0.69
PTPRA-206ENST00000430705 SMCHD1A6NHR9 2005 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 RTP1P59025 263 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 LRRC41Q15345 812 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 SLFN13Q68D06 897 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 ZNF589Q86UQ0 364 aaPredicted RBP19.35■□□□□ 0.69
PTPRA-206ENST00000430705 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
PTPRA-206ENST00000430705 ANAPC4Q9UJX5 808 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 LCTP09848 1927 aa19.35■□□□□ 0.69
PTPRA-206ENST00000430705 MDM2Q00987 491 aaPredicted RBP19.34■□□□□ 0.69
PTPRA-206ENST00000430705 SNX17Q15036 470 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 SMC5Q8IY18 1101 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 CPXCR1Q8N123 301 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 LNPKQ9C0E8 428 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 FEM1BQ9UK73 627 aa19.34■□□□□ 0.69
PTPRA-206ENST00000430705 ZNF536O15090 1300 aa19.33■□□□□ 0.69
PTPRA-206ENST00000430705 LAMA4Q16363 1823 aa19.33■□□□□ 0.69
PTPRA-206ENST00000430705 SNAI1O95863 264 aaPredicted RBP19.33■□□□□ 0.68
PTPRA-206ENST00000430705 BMP3P12645 472 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 NOVP48745 357 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 TDHQ8IZJ6 230 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 ARRDC4Q8NCT1 418 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 CHMP4CQ96CF2 233 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 GMCL1Q96IK5 515 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 HELLSQ9NRZ9 838 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 MCM3APO60318 1980 aa19.33■□□□□ 0.68
PTPRA-206ENST00000430705 TMEM232C9JQI7 657 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 KBTBD13C9JR72 458 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 ADCY6O43306 1168 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 IGHDP01880 384 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
PTPRA-206ENST00000430705 FGRP09769 529 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 ADCYAP1R1P41586 468 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 NMIQ13287 307 aaPredicted RBP19.32■□□□□ 0.68
PTPRA-206ENST00000430705 ALX1Q15699 326 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 SLC39A5Q6ZMH5 540 aa19.32■□□□□ 0.68
PTPRA-206ENST00000430705 UBE2OQ9C0C9 1292 aaKnown RBP19.32■□□□□ 0.68
PTPRA-206ENST00000430705 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 ZBED4O75132 1171 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 PGK1P00558 417 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 SLC4A3P48751 1232 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 OAZ1P54368 228 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 LRIT3Q3SXY7 679 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 TRIM60Q495X7 471 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 XPNPEP3Q9NQH7 507 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 PHF24Q9UPV7 400 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 ATP11BQ9Y2G3 1177 aa19.31■□□□□ 0.68
PTPRA-206ENST00000430705 ZMYM6O95789 1325 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 TSPY2A6NKD2 308 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 ORC4O43929 436 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 FGAP02671 866 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 MYCNP04198 464 aaPredicted RBP19.3■□□□□ 0.68
PTPRA-206ENST00000430705 MCCP23508 829 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 KCTD1Q719H9 257 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
PTPRA-206ENST00000430705 SYNRGQ9UMZ2 1314 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 HSPD1P10809 573 aaKnown RBP19.29■□□□□ 0.68
PTPRA-206ENST00000430705 RARBP10826 455 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 AKR1A1P14550 325 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 STAT2P52630 851 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
PTPRA-206ENST00000430705 MCMDC2Q4G0Z9 681 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 ZNF467Q7Z7K2 595 aaPredicted RBP19.29■□□□□ 0.68
PTPRA-206ENST00000430705 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
PTPRA-206ENST00000430705 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 KATNBL1Q9H079 304 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 PDLIM7Q9NR12 457 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 HOMER2Q9NSB8 354 aa19.29■□□□□ 0.68
PTPRA-206ENST00000430705 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
PTPRA-206ENST00000430705 ASTN1O14525 1302 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 MYADML2A6NDP7 307 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 PLA2G6O60733 806 aa19.28■□□□□ 0.68
PTPRA-206ENST00000430705 SLC1A4P43007 532 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms