RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NMIQ13287 307 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-202ENST00000430200 SNRNP48Q6IEG0 339 aaKnown RBP14.04□□□□□ -0.16
HDAC4-202ENST00000430200 MKL1Q969V6 931 aa14.04□□□□□ -0.16
HDAC4-202ENST00000430200 MMP19Q99542 508 aa14.04□□□□□ -0.16
HDAC4-202ENST00000430200 DNAJC25-GNG10A0A024R161 153 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 FCER1AP12319 257 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-202ENST00000430200 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-202ENST00000430200 TFAP4Q01664 338 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 B4GALNT3Q6L9W6 998 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 KIFC2Q96AC6 838 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 EVI5LQ96CN4 794 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
HDAC4-202ENST00000430200 DDX49Q9Y6V7 483 aaKnown RBP14.03□□□□□ -0.16
HDAC4-202ENST00000430200 ZNF536O15090 1300 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 PRUNE2Q8WUY3 3088 aa14.03□□□□□ -0.16
HDAC4-202ENST00000430200 GBF1Q92538 1859 aa14.02□□□□□ -0.16
HDAC4-202ENST00000430200 ASTN1O14525 1302 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 DNM1LO00429 736 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 SEPT4O43236 478 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 SLC25A27O95847 323 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 TTLL1O95922 423 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 ZNF865P0CJ78 1059 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-202ENST00000430200 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 TBC1D10CQ8IV04 446 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 SENP6Q9GZR1 1112 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-202ENST00000430200 IL25Q9H293 177 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.17
HDAC4-202ENST00000430200 NOVP48745 357 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 SNAP25P60880 206 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 SLFN13Q68D06 897 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-202ENST00000430200 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 NACAP1Q9BZK3 213 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 CHD9Q3L8U1 2897 aa14.01□□□□□ -0.17
HDAC4-202ENST00000430200 NEDD4P46934 1319 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 MYADML2A6NDP7 307 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 ATP2A1O14983 1001 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 MSCO60682 206 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
HDAC4-202ENST00000430200 FGRP09769 529 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 BMP3P12645 472 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 PTGS1P23219 599 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 SLC4A3P48751 1232 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 RTP1P59025 263 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 HAND2P61296 217 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 PDE4BQ07343 736 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 KCTD2Q14681 263 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 LRRC41Q15345 812 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 LRRFIP1Q32MZ4 808 aaKnown RBP14□□□□□ -0.17
HDAC4-202ENST00000430200 KCTD1Q719H9 257 aa14□□□□□ -0.17
HDAC4-202ENST00000430200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC4-202ENST00000430200 PRPF38AQ8NAV1 312 aaKnown RBP14□□□□□ -0.17
HDAC4-202ENST00000430200 A0A0C4DFX4 3053 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 ZMYM6O95789 1325 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 TMEM232C9JQI7 657 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 ORC4O43929 436 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 ADAMTS4O75173 837 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 PGK1P00558 417 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 FGAP02671 866 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 HSPD1P10809 573 aaKnown RBP13.99□□□□□ -0.17
HDAC4-202ENST00000430200 MCCP23508 829 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 BMP8BP34820 402 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-202ENST00000430200 NUCB1Q02818 461 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 SNX17Q15036 470 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 ALX1Q15699 326 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 KATNBL1Q9H079 304 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 HELLSQ9NRZ9 838 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 SYNPO2Q9UMS6 1093 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 STX8Q9UNK0 236 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 REV3LO60673 3130 aa13.99□□□□□ -0.17
HDAC4-202ENST00000430200 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 SYNRGQ9UMZ2 1314 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 A0A1W2PPC1 479 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-202ENST00000430200 PDE4AP27815 886 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 TRIM60Q495X7 471 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 RCSD1Q6JBY9 416 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 XPNPEP3Q9NQH7 507 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 MTMR7Q9Y216 660 aa13.98□□□□□ -0.17
HDAC4-202ENST00000430200 DIS3Q9Y2L1 958 aaKnown RBP13.98□□□□□ -0.17
HDAC4-202ENST00000430200 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
HDAC4-202ENST00000430200 MCMDC2Q4G0Z9 681 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms