RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ELNP15502 786 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 ERCC3P19447 782 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 PTPREP23469 700 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 GRB14Q14449 540 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 BTNL9Q6UXG8 535 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 RIOX2Q8IUF8 465 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 DCAF4Q8WV16 495 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 RIPK3Q9Y572 518 aa20.5■□□□□ 0.87
CTSD-203ENST00000429746 SLC1A4P43007 532 aa20.49■□□□□ 0.87
CTSD-203ENST00000429746 ADCY3O60266 1144 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 CCNA1P78396 465 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 ZNF543Q08ER8 600 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 TRIM32Q13049 653 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 MTFR1Q15390 333 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 SAMD1Q6SPF0 538 aaPredicted RBP20.48■□□□□ 0.87
CTSD-203ENST00000429746 RASEFQ8IZ41 740 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 TRIB2Q92519 343 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 KCNB2Q92953 911 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 KIFC2Q96AC6 838 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 LCTP09848 1927 aa20.48■□□□□ 0.87
CTSD-203ENST00000429746 PLXNA1Q9UIW2 1896 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 GJB1P08034 283 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 HOXC6P09630 235 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 XRCC5P13010 732 aaKnown RBP20.47■□□□□ 0.87
CTSD-203ENST00000429746 STAT3P40763 770 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 STAT2P52630 851 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 CCL14Q16627 93 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 KIAA1211Q6ZU35 1233 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.87
CTSD-203ENST00000429746 IQCA1Q86XH1 822 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 IGDCC4Q8TDY8 1250 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 SOCS4Q8WXH5 440 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 FLRT1Q9NZU1 646 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 PRR12Q9ULL5 1215 aa20.47■□□□□ 0.87
CTSD-203ENST00000429746 SLC15A5A6NIM6 579 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 COBLO75128 1261 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 MAP2K5Q13163 448 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 TSGA10IPQ3SY00 556 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 CHST3Q7LGC8 479 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 FAM160B2Q86V87 743 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 NPLOC4Q8TAT6 608 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 NUDT12Q9BQG2 462 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
CTSD-203ENST00000429746 BIN2Q9UBW5 565 aaPredicted RBP20.46■□□□□ 0.87
CTSD-203ENST00000429746 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
CTSD-203ENST00000429746 FRMPD2Q68DX3 1309 aaPredicted RBP20.46■□□□□ 0.87
CTSD-203ENST00000429746 CEP290O15078 2479 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 CYP2B6P20813 491 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 SLC16A2P36021 539 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 GJA8P48165 433 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 SLC35G1Q2M3R5 365 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 MAP3K21Q5TCX8 1036 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 TEX13BQ9BXU2 312 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 RANBP17Q9H2T7 1088 aaKnown RBP20.45■□□□□ 0.86
CTSD-203ENST00000429746 MROH8Q9H579 483 aa20.45■□□□□ 0.86
CTSD-203ENST00000429746 RAVER2Q9HCJ3 691 aaKnown RBP20.45■□□□□ 0.86
CTSD-203ENST00000429746 SLC25A27O95847 323 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 INHAP05111 366 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 CCL5P13501 91 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 TAL1P17542 331 aaPredicted RBP20.44■□□□□ 0.86
CTSD-203ENST00000429746 ADORA2AP29274 412 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 OAZ1P54368 228 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 SNAP25P60880 206 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 PLS1Q14651 629 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 ADCK5Q3MIX3 580 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 SNRNP48Q6IEG0 339 aaKnown RBP20.44■□□□□ 0.86
CTSD-203ENST00000429746 ABRAQ8N0Z2 381 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 CHURC1Q8WUH1 139 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 APBA2Q99767 749 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 CPVLQ9H3G5 476 aa20.44■□□□□ 0.86
CTSD-203ENST00000429746 STRNO43815 780 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 RGS2P41220 211 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 CCDC96Q2M329 555 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 NCAPG2Q86XI2 1143 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 AGBL1Q96MI9 1066 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 UBAC1Q9BSL1 405 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 RNF208Q9H0X6 261 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
CTSD-203ENST00000429746 FRMPD3Q5JV73 1810 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 ZBED4O75132 1171 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 MYCP01106 439 aaPredicted RBP20.42■□□□□ 0.86
CTSD-203ENST00000429746 FDX1P10109 184 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 TROAPQ12815 778 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 TRDNQ13061 729 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 IFIT1BQ5T764 474 aaKnown RBP20.42■□□□□ 0.86
CTSD-203ENST00000429746 SYDE2Q5VT97 1194 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 FGD4Q96M96 766 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 UNC93B1Q9H1C4 597 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 LY9Q9HBG7 655 aa20.42■□□□□ 0.86
CTSD-203ENST00000429746 DNAJC25-GNG10A0A024R161 153 aa20.41■□□□□ 0.86
CTSD-203ENST00000429746 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms