RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TDO2P48775 406 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 KMT5BQ4FZB7 885 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 SPECC1LQ69YQ0 1117 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 PNMA8AQ86V59 439 aaPredicted RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 RAB11FIP4Q86YS3 637 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 MNS1Q8NEH6 495 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 UBXN4Q92575 508 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 ESR2Q92731 530 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.825e-7■■□□□ 11.6
GABPB1-205ENST00000429662 FERMT2Q96AC1 680 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 BRMS1Q9HCU9 246 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 GJB4Q9NTQ9 266 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 GNL3LQ9NVN8 582 aaKnown RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 AATFQ9NY61 560 aaKnown RBP eCLIP9.9□□□□□ -0.823e-7■■■□□ 15.6
GABPB1-205ENST00000429662 FBXO2Q9UK22 296 aaPredicted RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 MAN1B1Q9UKM7 699 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.82
GABPB1-205ENST00000429662 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
GABPB1-205ENST00000429662 ARAP2Q8WZ64 1704 aa9.9□□□□□ -0.83
GABPB1-205ENST00000429662 AKAP11Q9UKA4 1901 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 PPP1R37O75864 691 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF18P17022 549 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 PLCD1P51178 756 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 ELF2Q15723 593 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 HABP4Q5JVS0 413 aaKnown RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 JAKMIP3Q5VZ66 844 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 STYK1Q6J9G0 422 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 REXO1L1PQ8IX06 675 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 STK11IPQ8N1F8 1099 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 FANCBQ8NB91 859 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 SPATA20Q8TB22 786 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 AIFM3Q96NN9 605 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 BAG1Q99933 345 aaPredicted RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 UBAC1Q9BSL1 405 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 UTP14AQ9BVJ6 771 aaKnown RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
GABPB1-205ENST00000429662 FANCLQ9NW38 375 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 SLC4A4Q9Y6R1 1079 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
GABPB1-205ENST00000429662 TRIM75PA6NK02 468 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 BTBD18B2RXH4 712 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 ATP1A3P13637 1013 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CASQ1P31415 396 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 FXR1P51114 621 aaKnown RBP eCLIP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 PPARAQ07869 468 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 SEMA3FQ13275 785 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 RASGRF1Q13972 1273 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 FILIP1LQ4L180 1135 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CIAPIN1Q6FI81 312 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 FBXO38Q6PIJ6 1188 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 TRIM65Q6PJ69 517 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 SLC51AQ86UW1 340 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 FOXP4Q8IVH2 680 aaPredicted RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 ZNF654Q8IZM8 581 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CCDC51Q96ER9 411 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 HHIPL1Q96JK4 782 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CLIC6Q96NY7 704 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 PANX2Q96RD6 677 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 ARMT1Q9H993 441 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 PPP2R2CQ9Y2T4 447 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 TRIOBPQ9H2D6 2365 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 POLR2DO15514 142 aaKnown RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 RXRAP19793 462 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 KRT2P35908 639 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 PDE6BP35913 854 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 EPS15P42566 896 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 GRM1Q13255 1194 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 SPATA1Q5VX52 437 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 TMCO3Q6UWJ1 677 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CATIPQ7Z7H3 387 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 GPC2Q8N158 579 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
GABPB1-205ENST00000429662 GSDMAQ96QA5 445 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 SENP2Q9HC62 589 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 RAI14Q9P0K7 980 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 LRP2BPQ9P2M1 347 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 NFE2L3Q9Y4A8 694 aa9.88□□□□□ -0.83
GABPB1-205ENST00000429662 CEP290O15078 2479 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 VCANP13611 3396 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 KLRG2A4D1S0 409 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 FAM155AB1AL88 458 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 AKR1B15C9JRZ8 316 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 ACTN4O43707 911 aaKnown RBP9.87□□□□□ -0.83
GABPB1-205ENST00000429662 DDAH1O94760 285 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
GABPB1-205ENST00000429662 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms