RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 OVOS2Q6IE36 1432 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 PRAG1Q86YV5 1406 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 ABCA3Q99758 1704 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 MAPK1P28482 360 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 ZC3H6P61129 1189 aaKnown RBP9.23□□□□□ -0.93
PTPRK-211ENST00000429595 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 SLC23A3Q6PIS1 610 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 C12orf40Q86WS4 652 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 OSBPL7Q9BZF2 842 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 SNX11Q9Y5W9 270 aa9.23□□□□□ -0.93
PTPRK-211ENST00000429595 DHX57Q6P158 1386 aaKnown RBP9.23□□□□□ -0.93
PTPRK-211ENST00000429595 IGF2BP3O00425 579 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRK-211ENST00000429595 TOMM70O94826 608 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 DDB1Q16531 1140 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 ZBTB37Q5TC79 503 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
PTPRK-211ENST00000429595 EOMESO95936 686 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 GSTT1P30711 240 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 NLGN2Q8NFZ4 835 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 GTF2IRD1Q9UHL9 959 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.94
PTPRK-211ENST00000429595 C16orf71Q8IYS4 520 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-211ENST00000429595 NGDNQ8NEJ9 315 aaKnown RBP9.2□□□□□ -0.94
PTPRK-211ENST00000429595 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRK-211ENST00000429595 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 RGPD3A6NKT7 1758 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-211ENST00000429595 RGPD4Q7Z3J3 1758 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 FANCGO15287 622 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 FARP2O94887 1054 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-211ENST00000429595 FMR1Q06787 632 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRK-211ENST00000429595 PDE4CQ08493 712 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 CEP44Q9C0F1 390 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 PPM1HQ9ULR3 514 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 SSH2Q76I76 1423 aa9.19□□□□□ -0.94
PTPRK-211ENST00000429595 CELA3AP09093 270 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 MAPK8P45983 427 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 IKZF1Q13422 519 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 LCE4AQ5TA78 99 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 PTF1AQ7RTS3 328 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 ASB11Q8WXH4 323 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 PCDHA4Q9UN74 947 aa9.18□□□□□ -0.94
PTPRK-211ENST00000429595 ABCC11Q96J66 1382 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 ZP2Q05996 745 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 PTPN11Q06124 597 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-211ENST00000429595 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 TMEM132EQ6IEE7 984 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 UTRNP46939 3433 aa9.17□□□□□ -0.94
PTPRK-211ENST00000429595 CNTNAP4Q9C0A0 1308 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 RBAK-RBAKDNI3L0D1 243 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 HTRA3P83110 453 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 SAFB2Q14151 953 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPRK-211ENST00000429595 INPP5AQ14642 412 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 FBRSQ9HAH7 460 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 SAMM50Q9Y512 469 aa9.16□□□□□ -0.94
PTPRK-211ENST00000429595 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-211ENST00000429595 BRD1O95696 1058 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 HSPA1AP0DMV8 641 aaKnown RBP9.15□□□□□ -0.94
PTPRK-211ENST00000429595 HSPA1BP0DMV9 641 aaKnown RBP9.15□□□□□ -0.94
PTPRK-211ENST00000429595 PCNX4Q63HM2 1172 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 LRFN4Q6PJG9 635 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 POGKQ9P215 609 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 CTNND2Q9UQB3 1225 aa9.15□□□□□ -0.94
PTPRK-211ENST00000429595 KIF1BO60333 1816 aa9.15□□□□□ -0.95
PTPRK-211ENST00000429595 RGPD8O14715 1765 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-211ENST00000429595 ADCY9O60503 1353 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 ANKRD30BQ9BXX2 1392 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 SLITRK5O94991 958 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 CLCN7P51798 805 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 LRRC14Q15048 493 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 FYB2Q5VWT5 728 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 PRDM5Q9NQX1 630 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-211ENST00000429595 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
PTPRK-211ENST00000429595 CLTCL1P53675 1640 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 GNAT3A8MTJ3 354 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 LRIG2O94898 1065 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 SLBPQ14493 270 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTPRK-211ENST00000429595 SCARA3Q6AZY7 606 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 SPOCD1Q6ZMY3 1216 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 TOM1L2Q6ZVM7 507 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 MARCH10Q8NA82 808 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-211ENST00000429595 GAL3ST3Q96A11 431 aa9.13□□□□□ -0.95
PTPRK-211ENST00000429595 ELMO3Q96BJ8 720 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms