RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 IQUBQ8NA54 791 aa18.43■□□□□ 0.54
MBD4-203ENST00000429544 ENOX1Q8TC92 643 aaKnown RBP18.43■□□□□ 0.54
MBD4-203ENST00000429544 UBA5Q9GZZ9 404 aa18.43■□□□□ 0.54
MBD4-203ENST00000429544 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
MBD4-203ENST00000429544 SEC63Q9UGP8 760 aaKnown RBP18.43■□□□□ 0.54
MBD4-203ENST00000429544 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 LONP1P36776 959 aaKnown RBP18.42■□□□□ 0.54
MBD4-203ENST00000429544 PIGSQ96S52 555 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
MBD4-203ENST00000429544 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 USP27XA6NNY8 438 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 PDHBP11177 359 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 SFPQP23246 707 aaKnown RBP eCLIP18.42■□□□□ 0.54
MBD4-203ENST00000429544 PDXDC2PQ6P474 469 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 HHIPL2Q6UWX4 724 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 CCDC12Q8WUD4 166 aaPredicted RBP18.42■□□□□ 0.54
MBD4-203ENST00000429544 MED15Q96RN5 788 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 ZMYND12Q9H0C1 365 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 TMEM60Q9H2L4 133 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 SERPINB13Q9UIV8 391 aa18.42■□□□□ 0.54
MBD4-203ENST00000429544 CDC25AP30304 524 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 PTPN21Q16825 1174 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 APOBEC3HQ6NTF7 200 aaKnown RBP18.41■□□□□ 0.54
MBD4-203ENST00000429544 BLZF1Q9H2G9 400 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 IGKV6D-41A0A0C4DH26 115 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 SMCO2A6NFE2 343 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 CRKP46108 304 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
MBD4-203ENST00000429544 GSDMAQ96QA5 445 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 PYM1Q9BRP8 204 aaKnown RBP18.41■□□□□ 0.54
MBD4-203ENST00000429544 INTS13Q9NVM9 706 aa18.41■□□□□ 0.54
MBD4-203ENST00000429544 MYH4Q9Y623 1939 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 TNNT1P13805 278 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 CD44P16070 742 aaKnown RBP18.4■□□□□ 0.54
MBD4-203ENST00000429544 ZNF18P17022 549 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
MBD4-203ENST00000429544 SMARCA1P28370 1054 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 TXLNAP40222 546 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 KLHL10Q6JEL2 608 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 VSTM4Q8IW00 320 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
MBD4-203ENST00000429544 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 DYNC1I1O14576 645 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 ERCC5P28715 1186 aaPredicted RBP18.4■□□□□ 0.54
MBD4-203ENST00000429544 SHMT1P34896 483 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 NFIAQ12857 509 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 DTHD1Q6ZMT9 781 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 KRT25Q7Z3Z0 450 aa18.4■□□□□ 0.54
MBD4-203ENST00000429544 H0YIN7 160 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
MBD4-203ENST00000429544 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 KIAA0825Q8IV33 1275 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 RIOX1Q9H6W3 641 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 SAMSN1Q9NSI8 373 aaKnown RBP18.39■□□□□ 0.53
MBD4-203ENST00000429544 TRMT1Q9NXH9 659 aaKnown RBP18.39■□□□□ 0.53
MBD4-203ENST00000429544 SYNRGQ9UMZ2 1314 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 PCDHAC2Q9Y5I4 1007 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.53
MBD4-203ENST00000429544 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 STX17P56962 302 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 CUL4BQ13620 913 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 ASPRV1Q53RT3 343 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 MTRQ99707 1265 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 GPCPD1Q9NPB8 672 aa18.39■□□□□ 0.53
MBD4-203ENST00000429544 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
MBD4-203ENST00000429544 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 GTPBP6O43824 516 aaPredicted RBP18.38■□□□□ 0.53
MBD4-203ENST00000429544 TTLL1O95922 423 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 GNA11P29992 359 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 STAT6P42226 847 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
MBD4-203ENST00000429544 NONOQ15233 471 aaKnown RBP eCLIP18.38■□□□□ 0.53
MBD4-203ENST00000429544 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 MPHOSPH10O00566 681 aaKnown RBP18.38■□□□□ 0.53
MBD4-203ENST00000429544 ECE2O60344 883 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 CHRNA5P30532 468 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 CACNB3P54284 484 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
MBD4-203ENST00000429544 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
MBD4-203ENST00000429544 RIOK3O14730 519 aaKnown RBP18.37■□□□□ 0.53
MBD4-203ENST00000429544 LETM2Q2VYF4 491 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 RXRBP28702 533 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 RBM10P98175 930 aaKnown RBP18.37■□□□□ 0.53
MBD4-203ENST00000429544 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 GOLGA8FQ08AF8 430 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 GOLGA8DPQ0D2H9 430 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 CT47A1Q5JQC4 288 aaPredicted RBP18.37■□□□□ 0.53
MBD4-203ENST00000429544 ZDHHC15Q96MV8 337 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 BIN2Q9UBW5 565 aaPredicted RBP18.37■□□□□ 0.53
MBD4-203ENST00000429544 CTNND2Q9UQB3 1225 aa18.37■□□□□ 0.53
MBD4-203ENST00000429544 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms