RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 DGKZQ13574 1117 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 COL9A3Q14050 684 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 STX1AQ16623 288 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 ANO6Q4KMQ2 910 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 ANAPC4Q9UJX5 808 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 MYH4Q9Y623 1939 aa11.02□□□□□ -0.64
NEDD1-203ENST00000429527 CPA1P15085 419 aa11.02□□□□□ -0.64
NEDD1-203ENST00000429527 LACTBP83111 547 aaPredicted RBP11.02□□□□□ -0.64
NEDD1-203ENST00000429527 RTEL1Q9NZ71 1219 aa11.02□□□□□ -0.64
NEDD1-203ENST00000429527 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.64
NEDD1-203ENST00000429527 JAG1P78504 1218 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 PICALMQ13492 652 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 MAPKAPK5Q8IW41 473 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 NEK1Q96PY6 1258 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 NR1I2O75469 434 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 USP14P54578 494 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 TAF1CQ15572 869 aaPredicted RBP11.02□□□□□ -0.65
NEDD1-203ENST00000429527 FAM110CQ1W6H9 321 aa11.02□□□□□ -0.65
NEDD1-203ENST00000429527 PTGS1P23219 599 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 GSDMDP57764 484 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 MCMDC2Q4G0Z9 681 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 TIGD1Q96MW7 591 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 FAM160A1Q05DH4 1040 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 FMR1NBQ8N0W7 255 aaPredicted RBP11.01□□□□□ -0.65
NEDD1-203ENST00000429527 ZNF830Q96NB3 372 aaPredicted RBP11.01□□□□□ -0.65
NEDD1-203ENST00000429527 ZHX2Q9Y6X8 837 aa11.01□□□□□ -0.65
NEDD1-203ENST00000429527 CYP21A2P08686 494 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 SCRN1Q12765 414 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 DHX32Q7L7V1 743 aaKnown RBP11□□□□□ -0.65
NEDD1-203ENST00000429527 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 LRRC37A2A6NM11 1700 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 GSG1L2A8MUP6 293 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 YEATS4O95619 227 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 USP5P45974 858 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 CAP1Q01518 475 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 TMEM179Q6ZVK1 233 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 LUZP1Q86V48 1076 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 CACTINQ8WUQ7 758 aaKnown RBP11□□□□□ -0.65
NEDD1-203ENST00000429527 ADAMTS5Q9UNA0 930 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 TAF3Q5VWG9 929 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 CTR9Q6PD62 1173 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 STOX1Q6ZVD7 989 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 NECAB1Q8N987 351 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 PXYLP1Q8TE99 480 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 TMX1Q9H3N1 280 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 TSKSQ9UJT2 592 aa11□□□□□ -0.65
NEDD1-203ENST00000429527 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
NEDD1-203ENST00000429527 IKBKBO14920 756 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 MBD4O95243 580 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 OSBPP22059 807 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 ZNF165P49910 485 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 GRM1Q13255 1194 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 NBPF11Q86T75 865 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 FCHSD1Q86WN1 690 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 USP6NLQ92738 828 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 PUS7LQ9H0K6 701 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 PLCD1P51178 756 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 CCDC144BQ3MJ40 725 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 ADALQ6DHV7 355 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 CCDC144CPQ8IYA2 1237 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 MKL1Q969V6 931 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 EMILIN3Q9NT22 766 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 USP17L10C9JJH3 530 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 FOXP2O15409 715 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 TRMT44Q8IYL2 757 aaKnown RBP10.99□□□□□ -0.65
NEDD1-203ENST00000429527 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 LPAR1Q92633 364 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 BRF1Q92994 677 aa10.99□□□□□ -0.65
NEDD1-203ENST00000429527 CTGFP29279 349 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 CD99L2Q8TCZ2 262 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 ZNF396Q96N95 335 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 GOLPH3LQ9H4A5 285 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 ARMT1Q9H993 441 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 NDUFB9Q9Y6M9 179 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 VPS37CA5D8V6 355 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 H2AFXP16104 143 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 HOXD10P28358 340 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-203ENST00000429527 CATSPERGQ6ZRH7 1159 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 SIAH1Q8IUQ4 282 aa10.98□□□□□ -0.65
NEDD1-203ENST00000429527 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms