RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 SIPA1L1O43166 1804 aa22.53■■□□□ 1.2
CASC4-203ENST00000429162 MYO1BO43795 1136 aa22.52■■□□□ 1.2
CASC4-203ENST00000429162 SARSP49591 514 aaKnown RBP22.52■■□□□ 1.2
CASC4-203ENST00000429162 ESYT2A0FGR8 921 aa22.51■■□□□ 1.19
CASC4-203ENST00000429162 LONP1P36776 959 aaKnown RBP22.51■■□□□ 1.19
CASC4-203ENST00000429162 PIGSQ96S52 555 aa22.51■■□□□ 1.19
CASC4-203ENST00000429162 A0A087X0B3 334 aa22.51■■□□□ 1.19
CASC4-203ENST00000429162 PPIP5K2O43314 1243 aa22.51■■□□□ 1.19
CASC4-203ENST00000429162 MLKLQ8NB16 471 aa22.51■■□□□ 1.19
CASC4-203ENST00000429162 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
CASC4-203ENST00000429162 FRMPD2Q68DX3 1309 aaPredicted RBP22.5■■□□□ 1.19
CASC4-203ENST00000429162 PSME4Q14997 1843 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 MPHOSPH10O00566 681 aaKnown RBP22.5■■□□□ 1.19
CASC4-203ENST00000429162 TXLNAP40222 546 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 BAG6P46379 1132 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 EIF6P56537 245 aaKnown RBP22.5■■□□□ 1.19
CASC4-203ENST00000429162 MORC3Q14149 939 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 SH3RF1Q7Z6J0 888 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 C4orf32Q8N8J7 132 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 SPATA20Q8TB22 786 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 NRBP1Q9UHY1 535 aa22.5■■□□□ 1.19
CASC4-203ENST00000429162 SMCO2A6NFE2 343 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 LAD1O00515 517 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
CASC4-203ENST00000429162 GRAMD1CQ8IYS0 662 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 KIAA1524Q8TCG1 905 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 TRIM34Q9BYJ4 488 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 VAT1LQ9HCJ6 419 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 SPTLC3Q9NUV7 552 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 PI4KBQ9UBF8 816 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 FAM198AQ9UFP1 575 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 ZNF543Q08ER8 600 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 NOLC1Q14978 699 aaKnown RBP eCLIP22.49■■□□□ 1.19
CASC4-203ENST00000429162 NONOQ15233 471 aaKnown RBP eCLIP22.49■■□□□ 1.19
CASC4-203ENST00000429162 INF2Q27J81 1249 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 CLEC10AQ8IUN9 316 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 ZFPM1Q8IX07 1006 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 IQUBQ8NA54 791 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 UBA5Q9GZZ9 404 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 PYCARDQ9ULZ3 195 aa22.49■■□□□ 1.19
CASC4-203ENST00000429162 COL2A1P02458 1487 aaPredicted RBP22.48■■□□□ 1.19
CASC4-203ENST00000429162 C21orf2O43822 256 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 NEMFO60524 1076 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 BMP6P22004 513 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 CACNB3P54284 484 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 CCDC144BQ3MJ40 725 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 GPATCH4Q5T3I0 446 aaKnown RBP22.48■■□□□ 1.19
CASC4-203ENST00000429162 PAGE5Q96GU1 130 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 PCDHAC2Q9Y5I4 1007 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 MYH4Q9Y623 1939 aa22.48■■□□□ 1.19
CASC4-203ENST00000429162 TCP10Q12799 353 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 IL17AQ16552 155 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 PPP1R18Q6NYC8 613 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 TTLL6Q8N841 843 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 DNAJC18Q9H819 358 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 IFNKQ9P0W0 207 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
CASC4-203ENST00000429162 ORC2Q13416 577 aaPredicted RBP22.47■■□□□ 1.19
CASC4-203ENST00000429162 DTHD1Q6ZMT9 781 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 ZSCAN29Q8IWY8 852 aaPredicted RBP22.47■■□□□ 1.19
CASC4-203ENST00000429162 RTKN2Q8IZC4 609 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 XPO4Q9C0E2 1151 aaKnown RBP22.47■■□□□ 1.19
CASC4-203ENST00000429162 GPCPD1Q9NPB8 672 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 IMPACTQ9P2X3 320 aa22.47■■□□□ 1.19
CASC4-203ENST00000429162 CBFA2T2O43439 604 aa22.46■■□□□ 1.19
CASC4-203ENST00000429162 PRPHP41219 470 aa22.46■■□□□ 1.19
CASC4-203ENST00000429162 E2F4Q16254 413 aa22.46■■□□□ 1.19
CASC4-203ENST00000429162 CT47A1Q5JQC4 288 aaPredicted RBP22.46■■□□□ 1.19
CASC4-203ENST00000429162 REXO1Q8N1G1 1221 aaKnown RBP22.46■■□□□ 1.19
CASC4-203ENST00000429162 ATRNL1Q5VV63 1379 aa22.45■■□□□ 1.19
CASC4-203ENST00000429162 DDTLA6NHG4 134 aaPredicted RBP22.45■■□□□ 1.18
CASC4-203ENST00000429162 ENTPD3O75355 529 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 AFMP43652 599 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 GSDMDP57764 484 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 FANCCQ00597 558 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 ATP2B2Q01814 1243 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 HSD3B7Q9H2F3 369 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 YDJCA8MPS7 323 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 DPYDQ12882 1025 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 DHX8Q14562 1220 aaKnown RBP22.45■■□□□ 1.18
CASC4-203ENST00000429162 CFAP100Q494V2 611 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 CERKLQ49MI3 558 aaPredicted RBP22.45■■□□□ 1.18
CASC4-203ENST00000429162 GSDMAQ96QA5 445 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 PSMD1Q99460 953 aa22.45■■□□□ 1.18
CASC4-203ENST00000429162 ADCY7P51828 1080 aa22.44■■□□□ 1.18
CASC4-203ENST00000429162 LRMPQ12912 555 aa22.44■■□□□ 1.18
CASC4-203ENST00000429162 SH3BP5LQ7L8J4 393 aa22.44■■□□□ 1.18
CASC4-203ENST00000429162 NEK8Q86SG6 692 aa22.44■■□□□ 1.18
CASC4-203ENST00000429162 CACTINQ8WUQ7 758 aaKnown RBP22.44■■□□□ 1.18
CASC4-203ENST00000429162 PNMA6FA0A0J9YX94 578 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 TATDN1Q6P1N9 297 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 PDXDC2PQ6P474 469 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 FILIP1Q7Z7B0 1213 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 C17orf53Q8N3J3 647 aaPredicted RBP22.43■■□□□ 1.18
CASC4-203ENST00000429162 ENOX1Q8TC92 643 aaKnown RBP22.43■■□□□ 1.18
CASC4-203ENST00000429162 SLC16A10Q8TF71 515 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 KANSL2Q9H9L4 492 aa22.43■■□□□ 1.18
CASC4-203ENST00000429162 JMJD4Q9H9V9 463 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms