RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MCF2L2Q86YR7 1114 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 UNC5CLQ8IV45 518 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 TPH2Q8IWU9 490 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 NLGN1Q8N2Q7 840 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 PARD3BQ8TEW8 1205 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 PPP4R1Q8TF05 950 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 CSRNP1Q96S65 589 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 VCX3AQ9NNX9 186 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 GNA14O95837 355 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 LIG4P49917 911 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 GBP6Q6ZN66 633 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 PHLDB2Q86SQ0 1253 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 CCDC170Q8IYT3 715 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 BBS5Q8N3I7 341 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 RPS6KC1Q96S38 1066 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 USP40Q9NVE5 1235 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 KCNH3Q9ULD8 1083 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 ABCC4O15439 1325 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 IBTKQ9P2D0 1353 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-208ENST00000428599 KRT10P13645 584 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 STMN1P16949 149 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 BEND3Q5T5X7 828 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 B4GALNT4Q76KP1 1039 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 MYO1AQ9UBC5 1043 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 PARP2Q9UGN5 583 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 BAG5Q9UL15 447 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 ARAP3Q8WWN8 1544 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 TBC1D8O95759 1140 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 GYG1P46976 350 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 KCNQ4P56696 695 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 TSTA3Q13630 321 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PROSER3Q2NL68 480 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 FAM160B1Q5W0V3 765 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 SCYL2Q6P3W7 929 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 NCAPG2Q86XI2 1143 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 CHMP6Q96FZ7 201 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 NUCKS1Q9H1E3 243 aaKnown RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 TBC1D7Q9P0N9 293 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ANGEL1Q9UNK9 670 aaKnown RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 RNASE9P60153 205 aaKnown RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 CCNA1P78396 465 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 RUFY4Q6ZNE9 571 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 CABP7Q86V35 215 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 VSIG1Q86XK7 387 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 IRAK4Q9NWZ3 460 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 MRPL11Q9Y3B7 192 aaKnown RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 KIF24Q5T7B8 1368 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 SGSM2O43147 1006 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 CEP104O60308 925 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 CUTAO60888 179 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PCK1P35558 622 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 MTMR3Q13615 1198 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ANO1Q5XXA6 986 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PALM2Q8IXS6 379 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 TPCN1Q9ULQ1 816 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 IQGAP3Q86VI3 1631 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 XPOTO43592 962 aaKnown RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 GSTA1P08263 222 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 GSTA2P09210 222 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PTPREP23469 700 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 IL6STP40189 918 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ANKRD35Q8N283 1001 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 SEC24BO95487 1268 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ATP5JP18859 108 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PHBP35232 272 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 SESTD1Q86VW0 696 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-208ENST00000428599 RILPQ96NA2 401 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 NRBP2Q9NSY0 501 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ATP8A2Q9NTI2 1148 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ANAPC5Q9UJX4 755 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 PLA2R1Q13018 1463 aa9.84□□□□□ -0.83
CTNND1-208ENST00000428599 ARHGAP31Q2M1Z3 1444 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 A6NNZ2 444 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 TUBB8Q3ZCM7 444 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 MAP3K21Q5TCX8 1036 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CDC37L1Q7L3B6 337 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 IQCDQ96DY2 449 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 SEPT10Q9P0V9 454 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 SNX14Q9Y5W7 946 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CDC42BPGQ6DT37 1551 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CDR2Q01850 454 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 PRPSAP1Q14558 356 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 TSNAXIP1Q2TAA8 658 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 EDC3Q96F86 508 aaKnown RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 KRT12Q99456 494 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 KIF9Q9HAQ2 790 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 N4BP1O75113 896 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms