RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 C1orf115Q9H7X2 142 aa9.9□□□□□ -0.82
ITSN1-216ENST00000428240 MSRAQ9UJ68 235 aa9.9□□□□□ -0.82
ITSN1-216ENST00000428240 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
ITSN1-216ENST00000428240 MROH7Q68CQ1 1323 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
ITSN1-216ENST00000428240 ARVCFO00192 962 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 DUSP11O75319 330 aaKnown RBP9.89□□□□□ -0.83
ITSN1-216ENST00000428240 C6orf222P0C671 652 aaPredicted RBP9.89□□□□□ -0.83
ITSN1-216ENST00000428240 CST5P28325 142 aaPredicted RBP9.89□□□□□ -0.83
ITSN1-216ENST00000428240 KCNQ1P51787 676 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 RABGGTBP53611 331 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 RAB30Q15771 203 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 MAMDC4Q6UXC1 1216 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 OTOP2Q7RTS6 562 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 MICALL1Q8N3F8 863 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 TMEM57Q8N5G2 664 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 HERVK_113Q902F9 699 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 SH2D4AQ9H788 454 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 SLC28A3Q9HAS3 691 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 IL23AQ9NPF7 189 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 SWAP70Q9UH65 585 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
ITSN1-216ENST00000428240 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
ITSN1-216ENST00000428240 UMODL1Q5DID0 1318 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 SYNGAP1Q96PV0 1343 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 ZNF532Q9HCE3 1301 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 NAV1Q8NEY1 1877 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 DNAJC25-GNG10A0A024R161 153 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 CYP2D7A0A087X1C5 515 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 TCRBV5S4A2TA0A5A2 114 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 CTAGE5O15320 804 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 PRKAB2O43741 272 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 CD4P01730 458 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 FGBP02675 491 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 EEF2P13639 858 aaKnown RBP9.88□□□□□ -0.83
ITSN1-216ENST00000428240 MYOGP15173 224 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 PDE6AP16499 860 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 ACVR2BQ13705 512 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 FAM83BQ5T0W9 1011 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 SLC9C2Q5TAH2 1124 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 TMED8Q6PL24 325 aaPredicted RBP9.88□□□□□ -0.83
ITSN1-216ENST00000428240 MSL3Q8N5Y2 521 aaKnown RBP9.88□□□□□ -0.83
ITSN1-216ENST00000428240 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 EPHX3Q9H6B9 360 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 RIPK3Q9Y572 518 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 PARP14Q460N5 1801 aa9.88□□□□□ -0.83
ITSN1-216ENST00000428240 BDP1A6H8Y1 2624 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 COL11A1P12107 1806 aaPredicted RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 RFXAPO00287 272 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 IPO8O15397 1037 aaKnown RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 RAD21O60216 631 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 CDK8P49336 464 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 GJA9P57773 515 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 BEX3Q00994 111 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 CCDC144BQ3MJ40 725 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 SLFNL1Q499Z3 407 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 GNASQ5JWF2 1037 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 PCSK9Q8NBP7 692 aaKnown RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 DDX11Q96FC9 970 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 FGD4Q96M96 766 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 NUP88Q99567 741 aaPredicted RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 UPF3AQ9H1J1 476 aaKnown RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 ARMT1Q9H993 441 aa9.87□□□□□ -0.83
ITSN1-216ENST00000428240 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
ITSN1-216ENST00000428240 ZNFX1Q9P2E3 1918 aaKnown RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 TLR3O15455 904 aaKnown RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 PTGS1P23219 599 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 COPB2P35606 906 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 CCL23P55773 120 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 SNRNP48Q6IEG0 339 aaKnown RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 AACSQ86V21 672 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 VWCEQ96DN2 955 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 CCDC17Q96LX7 622 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 MTIF3Q9H2K0 278 aaKnown RBP9.86□□□□□ -0.83
ITSN1-216ENST00000428240 HIPK3Q9H422 1215 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 SPC25Q9HBM1 224 aa9.86□□□□□ -0.83
ITSN1-216ENST00000428240 ASTN1O14525 1302 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 GRIN2DO15399 1336 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 USP17L12C9JPN9 530 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 USP17L21D6R901 530 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 GOLIM4O00461 696 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 ERC2O15083 957 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 CHGBP05060 677 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
ITSN1-216ENST00000428240 C12orf60Q5U649 245 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 KRT40Q6A162 431 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 CXCL17Q6UXB2 119 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 C16orf86Q6ZW13 317 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 ZNF467Q7Z7K2 595 aaPredicted RBP9.85□□□□□ -0.83
ITSN1-216ENST00000428240 CPXCR1Q8N123 301 aa9.85□□□□□ -0.83
ITSN1-216ENST00000428240 SLC43A3Q8NBI5 491 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms