RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CNNM2Q9H8M5 875 aa19.66■□□□□ 0.74
VRK2-204ENST00000428021 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
VRK2-204ENST00000428021 PPP4R2Q9NY27 417 aa19.66■□□□□ 0.74
VRK2-204ENST00000428021 MTMR7Q9Y216 660 aa19.66■□□□□ 0.74
VRK2-204ENST00000428021 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
VRK2-204ENST00000428021 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
VRK2-204ENST00000428021 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 ATP2A1O14983 1001 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 STRNO43815 780 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 HOXC6P09630 235 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 DCAF4Q8WV16 495 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 APBA2Q99767 749 aa19.65■□□□□ 0.74
VRK2-204ENST00000428021 RBM8AQ9Y5S9 174 aaKnown RBP19.65■□□□□ 0.74
VRK2-204ENST00000428021 ZNFX1Q9P2E3 1918 aaKnown RBP19.64■□□□□ 0.74
VRK2-204ENST00000428021 ZBED4O75132 1171 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 ADORA2AP29274 412 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 STAT2P52630 851 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 MLLT1Q03111 559 aaPredicted RBP19.64■□□□□ 0.73
VRK2-204ENST00000428021 FAM160B2Q86V87 743 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 IQCA1Q86XH1 822 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
VRK2-204ENST00000428021 TEX13BQ9BXU2 312 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 RNF208Q9H0X6 261 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 RIPK3Q9Y572 518 aa19.64■□□□□ 0.73
VRK2-204ENST00000428021 COBLO75128 1261 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 IGHA2P01877 340 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 GJB1P08034 283 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 SNHG28P0DPA3 235 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 PDHBP11177 359 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 CCDC178Q5BJE1 867 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 MAP3K21Q5TCX8 1036 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 TTBK2Q6IQ55 1244 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 STOX1Q6ZVD7 989 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 CYB5R4Q7L1T6 521 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 TRMT44Q8IYL2 757 aaKnown RBP19.63■□□□□ 0.73
VRK2-204ENST00000428021 ABRAQ8N0Z2 381 aa19.63■□□□□ 0.73
VRK2-204ENST00000428021 ENAHQ8N8S7 591 aaPredicted RBP19.63■□□□□ 0.73
VRK2-204ENST00000428021 RAVER2Q9HCJ3 691 aaKnown RBP19.63■□□□□ 0.73
VRK2-204ENST00000428021 ISY1Q9ULR0 285 aaKnown RBP19.63■□□□□ 0.73
VRK2-204ENST00000428021 E7EWF7 191 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 FDX1P10109 184 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
VRK2-204ENST00000428021 CCDC96Q2M329 555 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 SNRNP48Q6IEG0 339 aaKnown RBP19.62■□□□□ 0.73
VRK2-204ENST00000428021 BTNL9Q6UXG8 535 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 KIAA1211Q6ZU35 1233 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 CPXCR1Q8N123 301 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 SHISA4Q96DD7 197 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 PAK6Q9NQU5 681 aaPredicted RBP19.62■□□□□ 0.73
VRK2-204ENST00000428021 PRR12Q9ULL5 1215 aa19.62■□□□□ 0.73
VRK2-204ENST00000428021 ZNF536O15090 1300 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 TNKSO95271 1327 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 CDC45O75419 566 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 FCER1AP12319 257 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 COPB2P35606 906 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 GJA8P48165 433 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 OAZ1P54368 228 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 ZNF543Q08ER8 600 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 IKQ13123 557 aaPredicted RBP19.61■□□□□ 0.73
VRK2-204ENST00000428021 SEC23AQ15436 765 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 DPP9Q86TI2 863 aa19.61■□□□□ 0.73
VRK2-204ENST00000428021 FRMPD2Q68DX3 1309 aaPredicted RBP19.6■□□□□ 0.73
VRK2-204ENST00000428021 RPTORQ8N122 1335 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 PRKAR2AP13861 404 aaKnown RBP19.6■□□□□ 0.73
VRK2-204ENST00000428021 SLC16A2P36021 539 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 SNAP25P60880 206 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 CACNB2Q08289 660 aaPredicted RBP19.6■□□□□ 0.73
VRK2-204ENST00000428021 NECTIN1Q15223 517 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 PNMA1Q8ND90 353 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 MMP19Q99542 508 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.6■□□□□ 0.73
VRK2-204ENST00000428021 GPCPD1Q9NPB8 672 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 ANO2Q9NQ90 1003 aa19.6■□□□□ 0.73
VRK2-204ENST00000428021 CTDP1Q9Y5B0 961 aaPredicted RBP19.6■□□□□ 0.73
VRK2-204ENST00000428021 SLC27A2O14975 620 aa19.59■□□□□ 0.73
VRK2-204ENST00000428021 TRDNQ13061 729 aa19.59■□□□□ 0.73
VRK2-204ENST00000428021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.59■□□□□ 0.73
VRK2-204ENST00000428021 U2AF1L4Q8WU68 220 aaKnown RBP19.59■□□□□ 0.73
VRK2-204ENST00000428021 AGBL1Q96MI9 1066 aa19.59■□□□□ 0.73
VRK2-204ENST00000428021 UBAC1Q9BSL1 405 aa19.59■□□□□ 0.73
VRK2-204ENST00000428021 HMX1Q9NP08 348 aaPredicted RBP19.59■□□□□ 0.73
VRK2-204ENST00000428021 SMCHD1A6NHR9 2005 aa19.59■□□□□ 0.73
VRK2-204ENST00000428021 SGPL1O95470 568 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 PGK2P07205 417 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 SLC4A3P48751 1232 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 CREB3L3Q68CJ9 461 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.72
VRK2-204ENST00000428021 NCOA7Q8NI08 942 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 DEFB118Q96PH6 123 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 RANBP17Q9H2T7 1088 aaKnown RBP19.58■□□□□ 0.72
VRK2-204ENST00000428021 KAT14Q9H8E8 782 aa19.58■□□□□ 0.72
VRK2-204ENST00000428021 PLXNA1Q9UIW2 1896 aa19.57■□□□□ 0.72
VRK2-204ENST00000428021 ANTXR2P58335 489 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms