RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 SYNRGQ9UMZ2 1314 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 SMIM22K7EJ46 135 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 ACLYP53396 1101 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 EPHB4P54760 987 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 SNRNP48Q6IEG0 339 aaKnown RBP20.31■□□□□ 0.84
PSMD4-203ENST00000427779 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 SYMPKQ92797 1274 aaKnown RBP20.31■□□□□ 0.84
PSMD4-203ENST00000427779 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
PSMD4-203ENST00000427779 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
PSMD4-203ENST00000427779 PRUNE2Q8WUY3 3088 aa20.3■□□□□ 0.84
PSMD4-203ENST00000427779 MROH7Q68CQ1 1323 aa20.3■□□□□ 0.84
PSMD4-203ENST00000427779 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.3■□□□□ 0.84
PSMD4-203ENST00000427779 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.3■□□□□ 0.84
PSMD4-203ENST00000427779 FAAP100Q0VG06 881 aa20.3■□□□□ 0.84
PSMD4-203ENST00000427779 LENG1Q96BZ8 264 aaPredicted RBP20.3■□□□□ 0.84
PSMD4-203ENST00000427779 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
PSMD4-203ENST00000427779 ZHX1Q9UKY1 873 aaPredicted RBP20.3■□□□□ 0.84
PSMD4-203ENST00000427779 CCDC174Q6PII3 467 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 MAMDC4Q6UXC1 1216 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 KLHDC9Q8NEP7 349 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 SPC25Q9HBM1 224 aa20.29■□□□□ 0.84
PSMD4-203ENST00000427779 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
PSMD4-203ENST00000427779 DUSP11O75319 330 aaKnown RBP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 DNAJB2P25686 324 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 ZNF467Q7Z7K2 595 aaPredicted RBP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 PRPF38AQ8NAV1 312 aaKnown RBP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 PCSK9Q8NBP7 692 aaKnown RBP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 PUS7LQ9H0K6 701 aaKnown RBP20.28■□□□□ 0.84
PSMD4-203ENST00000427779 MKNK2Q9HBH9 465 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 MCM3APO60318 1980 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 TTC28Q96AY4 2481 aa20.28■□□□□ 0.84
PSMD4-203ENST00000427779 ELP1O95163 1332 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 DNAJC25-GNG10A0A024R161 153 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 F5H6K3 240 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 ZBED4O75132 1171 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 SNAI1O95863 264 aaPredicted RBP20.27■□□□□ 0.84
PSMD4-203ENST00000427779 TIMP1P01033 207 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 CHGBP05060 677 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 CST5P28325 142 aaPredicted RBP20.27■□□□□ 0.84
PSMD4-203ENST00000427779 KLRC3Q07444 240 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 KCNA10Q16322 511 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 SBK1Q52WX2 424 aa20.27■□□□□ 0.84
PSMD4-203ENST00000427779 NUP88Q99567 741 aaPredicted RBP20.27■□□□□ 0.84
PSMD4-203ENST00000427779 NDUFB10O96000 172 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 C6orf222P0C671 652 aaPredicted RBP20.26■□□□□ 0.83
PSMD4-203ENST00000427779 RASA1P20936 1047 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 PPIGQ13427 754 aaKnown RBP eCLIP20.26■□□□□ 0.838e-6■■■■□ 22.7
PSMD4-203ENST00000427779 CCSAPQ6IQ19 270 aaPredicted RBP20.26■□□□□ 0.83
PSMD4-203ENST00000427779 MFSD5Q6N075 450 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 GIMAP6Q6P9H5 292 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 FBXO40Q9UH90 709 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 TBX21Q9UL17 535 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 RIPK3Q9Y572 518 aa20.26■□□□□ 0.83
PSMD4-203ENST00000427779 SLC4A3P48751 1232 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 ACVR2BQ13705 512 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 GRIN2CQ14957 1233 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
PSMD4-203ENST00000427779 CPXCR1Q8N123 301 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 ANKRD35Q8N283 1001 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 TIFAQ96CG3 184 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 ABHD16BQ9H3Z7 469 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 PRDM6Q9NQX0 595 aa20.25■□□□□ 0.83
PSMD4-203ENST00000427779 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.25■□□□□ 0.83
PSMD4-203ENST00000427779 A0A0U1RQG5 324 aaPredicted RBP20.24■□□□□ 0.83
PSMD4-203ENST00000427779 ASGR1P07306 291 aa20.24■□□□□ 0.83
PSMD4-203ENST00000427779 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
PSMD4-203ENST00000427779 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
PSMD4-203ENST00000427779 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.24■□□□□ 0.834e-6■□□□□ 8
PSMD4-203ENST00000427779 SYNPO2Q9UMS6 1093 aa20.24■□□□□ 0.83
PSMD4-203ENST00000427779 MYADML2A6NDP7 307 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 MINDY4BA8MYZ0 360 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 TLR3O15455 904 aaKnown RBP20.23■□□□□ 0.83
PSMD4-203ENST00000427779 OAZ1P54368 228 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 TJAP1Q5JTD0 557 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 TMEM199Q8N511 208 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 UPF3AQ9H1J1 476 aaKnown RBP20.23■□□□□ 0.83
PSMD4-203ENST00000427779 SLC38A10Q9HBR0 1119 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
PSMD4-203ENST00000427779 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
PSMD4-203ENST00000427779 CDK7P50613 346 aa20.22■□□□□ 0.83
PSMD4-203ENST00000427779 GJA9P57773 515 aa20.22■□□□□ 0.83
PSMD4-203ENST00000427779 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
PSMD4-203ENST00000427779 PSRC1Q6PGN9 363 aaPredicted RBP20.22■□□□□ 0.83
PSMD4-203ENST00000427779 CCDC129Q6ZRS4 1044 aa20.22■□□□□ 0.83
PSMD4-203ENST00000427779 ZNF444Q8N0Y2 327 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms