RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 HTTP42858 3142 aa18.43■□□□□ 0.54
CLK3P2-201ENST00000427566 PLXNA1Q9UIW2 1896 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 BMP3P12645 472 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 ERCC3P19447 782 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 MCCP23508 829 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 HSPA4P34932 840 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 RGS2P41220 211 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 RALYLQ86SE5 291 aaKnown RBP18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
CLK3P2-201ENST00000427566 VWA5AO00534 786 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 TOP1P11387 765 aaKnown RBP18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 PTPREP23469 700 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 SLC1A4P43007 532 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 SEC23AQ15436 765 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 DGKHQ86XP1 1220 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 TTC14Q96N46 770 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 UNC93B1Q9H1C4 597 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 SYNPO2Q9UMS6 1093 aa18.41■□□□□ 0.54
CLK3P2-201ENST00000427566 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 MAP2K5Q13163 448 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 MORN1Q5T089 497 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 CPXCR1Q8N123 301 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 PRPF38AQ8NAV1 312 aaKnown RBP18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 TRIB2Q92519 343 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 KCNB2Q92953 911 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 CENPFP49454 3210 aa18.4■□□□□ 0.54
CLK3P2-201ENST00000427566 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 ZBED4O75132 1171 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 HMGCRP04035 888 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 ZKSCAN1P17029 563 aaPredicted RBP18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 NT5C2P49902 561 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 TRIM32Q13049 653 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 DPP9Q86TI2 863 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 ANKS1AQ92625 1134 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 APBA2Q99767 749 aa18.39■□□□□ 0.54
CLK3P2-201ENST00000427566 IFIT3O14879 490 aaKnown RBP18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 CPA1P15085 419 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 STAT3P40763 770 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 CCL14Q16627 93 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 SHCBP1Q8NEM2 672 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 IGDCC4Q8TDY8 1250 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 GMCL1Q96IK5 515 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 TCEANC2Q96MN5 208 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 MROH8Q9H579 483 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
CLK3P2-201ENST00000427566 ZNF236Q9UL36 1845 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 PRC1O43663 620 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 SLC25A27O95847 323 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 PDHBP11177 359 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 STAT2P52630 851 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 USP6NLQ92738 828 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
CLK3P2-201ENST00000427566 FRMPD2Q68DX3 1309 aaPredicted RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 STRNO43815 780 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 XRCC5P13010 732 aaKnown RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 ADORA2AP29274 412 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 GRB14Q14449 540 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 CCDC178Q5BJE1 867 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 TTBK2Q6IQ55 1244 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 RIOX2Q8IUF8 465 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 CHURC1Q8WUH1 139 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 DEFB118Q96PH6 123 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 KAT14Q9H8E8 782 aa18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
CLK3P2-201ENST00000427566 MYH6P13533 1939 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 GJB1P08034 283 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 FCER1AP12319 257 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 MCM5P33992 734 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 NPLOC4Q8TAT6 608 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 MMP19Q99542 508 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 TEX13BQ9BXU2 312 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 GPCPD1Q9NPB8 672 aa18.36■□□□□ 0.53
CLK3P2-201ENST00000427566 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 GOLGA8HP0CJ92 632 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 SLC16A2P36021 539 aa18.35■□□□□ 0.53
CLK3P2-201ENST00000427566 SNAP25P60880 206 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms