RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 NPM3O75607 178 aaKnown RBP24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 RAD17O75943 681 aa24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 SHROOM1Q2M3G4 852 aaPredicted RBP24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 FOXP4Q8IVH2 680 aaPredicted RBP24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 FAM177A1Q8N128 213 aaPredicted RBP24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 PCDHA5Q9Y5H7 936 aa24.81■■□□□ 1.56
CNEP1R1-202ENST00000427478 ACTN4O43707 911 aaKnown RBP24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 MDM2Q00987 491 aaPredicted RBP24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 POSTNQ15063 836 aa24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 RSBN1LQ6PCB5 846 aaPredicted RBP24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 ELOA2Q8IYF1 753 aaPredicted RBP24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 A0A087X0B3 334 aa24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 PRR29P0C7W0 189 aa24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 ZNF543Q08ER8 600 aa24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 CERKLQ49MI3 558 aaPredicted RBP24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 DHX58Q96C10 678 aa24.8■■□□□ 1.56
CNEP1R1-202ENST00000427478 SMCO2A6NFE2 343 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 PSMD14O00487 310 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 INF2Q27J81 1249 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 SARM1Q6SZW1 724 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 GRAMD1CQ8IYS0 662 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 TTC12Q9H892 705 aaPredicted RBP24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 ZBTB7AO95365 584 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 SOGA3Q5TF21 947 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 C6orf50Q9HD87 102 aa24.79■■□□□ 1.56
CNEP1R1-202ENST00000427478 GOLGA6L6A8MZA4 724 aa24.78■■□□□ 1.56
CNEP1R1-202ENST00000427478 IL17AQ16552 155 aa24.78■■□□□ 1.56
CNEP1R1-202ENST00000427478 CCDC96Q2M329 555 aa24.78■■□□□ 1.56
CNEP1R1-202ENST00000427478 DRC7Q8IY82 874 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 ATRNL1Q5VV63 1379 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 ENTPD3O75355 529 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 GNA11P29992 359 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 PPP4R3BQ5MIZ7 849 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 TTBK2Q6IQ55 1244 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 TATDN1Q6P1N9 297 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 C4orf32Q8N8J7 132 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 ARFGEF1Q9Y6D6 1849 aa24.77■■□□□ 1.56
CNEP1R1-202ENST00000427478 KANK3Q6NY19 840 aa24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 KCTD1Q719H9 257 aa24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 ZBTB12Q9Y330 459 aaPredicted RBP24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 VIL1P09327 827 aaKnown RBP24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 EEF2P13639 858 aaKnown RBP24.76■■□□□ 1.55
CNEP1R1-202ENST00000427478 RAD21O60216 631 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 GDF11O95390 407 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 ARL6IP4Q66PJ3 421 aaKnown RBP24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 KRT25Q7Z3Z0 450 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 ADGRF4Q8IZF3 695 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 COA7Q96BR5 231 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 JMJD4Q9H9V9 463 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 MAN1B1Q9UKM7 699 aa24.75■■□□□ 1.55
CNEP1R1-202ENST00000427478 COL2A1P02458 1487 aaPredicted RBP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 CLRN2A0PK11 232 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SPDYE2BA6NHP3 402 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 hCG_1984214I3L0E3 225 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 ZNF500O60304 480 aaPredicted RBP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SPDYE6P0CI01 402 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SEPT2Q15019 361 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 GPATCH4Q5T3I0 446 aaKnown RBP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 ZNF713Q8N859 430 aaPredicted RBP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SMARCE1Q969G3 411 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 KANSL2Q9H9L4 492 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 TMOD2Q9NZR1 351 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 ESYT2A0FGR8 921 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 TCP10L2B9ZVM9 353 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SLC16A2P36021 539 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 NCAPHQ15003 741 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 NONOQ15233 471 aaKnown RBP eCLIP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 CSRNP1Q96S65 589 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 GMLQ99445 158 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 HDAC9Q9UKV0 1011 aa24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
CNEP1R1-202ENST00000427478 SMTNL1A8MU46 457 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 SLFN14P0C7P3 912 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 BMP6P22004 513 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 NIM1KQ8IY84 436 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 TMEM60Q9H2L4 133 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 PIM2Q9P1W9 311 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 CDC25BP30305 580 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 AFMP43652 599 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 ICA1Q05084 483 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 DLGAP5Q15398 846 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 ABCB5Q2M3G0 1257 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 NT5DC1Q5TFE4 455 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 TMEM179Q6ZVK1 233 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 REXO1Q8N1G1 1221 aaKnown RBP24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 CCDC34Q96HJ3 373 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 MRFAP1L1Q96HT8 127 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 NYAP2Q9P242 653 aa24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 BIN2Q9UBW5 565 aaPredicted RBP24.73■■□□□ 1.55
CNEP1R1-202ENST00000427478 BRCA1P38398 1863 aaKnown RBP24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 TPM3P06753 285 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 PTGS1P23219 599 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 SARSP49591 514 aaKnown RBP24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 TPM4P67936 248 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 JAKMIP3Q5VZ66 844 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 OGFOD1Q8N543 542 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 KCNF1Q9H3M0 494 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 TMEM260Q9NX78 707 aa24.72■■□□□ 1.55
CNEP1R1-202ENST00000427478 NRBP1Q9UHY1 535 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms