RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 KCTD2Q14681 263 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 TRIM60Q495X7 471 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 DEFB123Q8N688 67 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 MKL1Q969V6 931 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 LENG1Q96BZ8 264 aaPredicted RBP12□□□□□ -0.49
GACAT3-201ENST00000426539 CEP95Q96GE4 821 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 TINF2Q9BSI4 451 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 NRBP1Q9UHY1 535 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 TTC41PQ6P2S7 1318 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 SALL3Q9BXA9 1300 aa12□□□□□ -0.49
GACAT3-201ENST00000426539 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 ATP2A1O14983 1001 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
GACAT3-201ENST00000426539 PGK1P00558 417 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 APPP05067 770 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 COPB2P35606 906 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 ZMYM1Q5SVZ6 1142 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
GACAT3-201ENST00000426539 SH3RF1Q7Z6J0 888 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
GACAT3-201ENST00000426539 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
GACAT3-201ENST00000426539 NEDD1Q8NHV4 660 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 FGD4Q96M96 766 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 TEX13BQ9BXU2 312 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
GACAT3-201ENST00000426539 COL11A1P12107 1806 aaPredicted RBP11.98□□□□□ -0.49
GACAT3-201ENST00000426539 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 C1orf53Q5VUE5 145 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
GACAT3-201ENST00000426539 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 TRIM43Q96BQ3 446 aaPredicted RBP11.98□□□□□ -0.49
GACAT3-201ENST00000426539 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 LBHD1Q9BQE6 289 aaPredicted RBP11.98□□□□□ -0.49
GACAT3-201ENST00000426539 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
GACAT3-201ENST00000426539 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
GACAT3-201ENST00000426539 ERC2O15083 957 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 ADAMTS4O75173 837 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 TTLL1O95922 423 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 RARBP10826 455 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 MX1P20591 662 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 ITGB8P26012 769 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 PPARAQ07869 468 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 CCDC129Q6ZRS4 1044 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
GACAT3-201ENST00000426539 CPXCR1Q8N123 301 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 KIFC2Q96AC6 838 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 INCENPQ9NQS7 918 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 SYNPO2Q9UMS6 1093 aa11.97□□□□□ -0.49
GACAT3-201ENST00000426539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
GACAT3-201ENST00000426539 LTBP2Q14767 1821 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 ZBED4O75132 1171 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 AKR1A1P14550 325 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 TFAP4Q01664 338 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 TLE2Q04725 743 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 SHHQ15465 462 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 LRRFIP1Q32MZ4 808 aaKnown RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 SLFN13Q68D06 897 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 CCSAPQ6IQ19 270 aaPredicted RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 MSL3Q8N5Y2 521 aaKnown RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 SLC17A8Q8NDX2 589 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 BADQ92934 168 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 NACAP1Q9BZK3 213 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 NAPBQ9H115 298 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.49
GACAT3-201ENST00000426539 PRKAG2Q9UGJ0 569 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 STXBP5LQ9Y2K9 1186 aa11.96□□□□□ -0.49
GACAT3-201ENST00000426539 ZNF536O15090 1300 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 SYNRGQ9UMZ2 1314 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
GACAT3-201ENST00000426539 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 ADCY6O43306 1168 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 TSPY3P0CV98 308 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 TSPY8P0CW00 308 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 BMP3P12645 472 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 PDE4BQ07343 736 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 GSE1Q14687 1217 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 VPS53Q5VIR6 699 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 RASGRP2Q7LDG7 609 aa11.95□□□□□ -0.5
GACAT3-201ENST00000426539 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
GACAT3-201ENST00000426539 RNF180Q86T96 592 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms