RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
COL12A1-205ENST00000425443 FUT2Q10981 343 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 CUL4BQ13620 913 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL12A1-205ENST00000425443 MYO1BO43795 1136 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 TSPY3P0CV98 308 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 TSPY8P0CW00 308 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 CYP2C19P33261 490 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 SLC51AQ86UW1 340 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 RPGRQ92834 1020 aaKnown RBP14.66□□□□□ -0.06
COL12A1-205ENST00000425443 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 CACNA1SQ13698 1873 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 DIXDC1Q155Q3 683 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 TMEM132AQ24JP5 1023 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 TRIML1Q8N9V2 468 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 RASGRP4Q8TDF6 673 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 PAGE5Q96GU1 130 aa14.66□□□□□ -0.06
COL12A1-205ENST00000425443 GPR101Q96P66 508 aaPredicted RBP14.66□□□□□ -0.06
COL12A1-205ENST00000425443 CNTNAP5Q8WYK1 1306 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 DUOX1Q9NRD9 1551 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 FGRP09769 529 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 ZNF804AQ7Z570 1209 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 PNMA1Q8ND90 353 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 SRRTQ9BXP5 876 aaKnown RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 CTNND2Q9UQB3 1225 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 RREB1Q92766 1687 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 TULP2O00295 520 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 CCDC172P0C7W6 258 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 PBX1P40424 430 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 GSTO1P78417 241 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 SATB1Q01826 763 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 MAP2K1Q02750 393 aaPredicted RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 CALR3Q96L12 384 aaKnown RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 SAP30BPQ9UHR5 308 aaKnown RBP14.65□□□□□ -0.06
COL12A1-205ENST00000425443 ADGRG1Q9Y653 693 aa14.65□□□□□ -0.06
COL12A1-205ENST00000425443 PPP1R3GB7ZBB8 358 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 FXR1P51114 621 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 NPY5RQ15761 445 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 SBK1Q52WX2 424 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 NEK11Q8NG66 645 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 GPKOWQ92917 476 aaPredicted RBP eCLIP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 PDS5AQ29RF7 1337 aaKnown RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 RGL2O15211 777 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 NFIXQ14938 502 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 SH3RF1Q7Z6J0 888 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 PPFIBP1Q86W92 1011 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 AMIGO3Q86WK7 504 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 IGSF22Q8N9C0 903 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 ADD3Q9UEY8 706 aaKnown RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 PUF60Q9UHX1 559 aaKnown RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 SYNRGQ9UMZ2 1314 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 AKR1B15C9JRZ8 316 aaPredicted RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 LDHCP07864 332 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 CALML3P27482 149 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 CASP14P31944 242 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 GRAPQ13588 217 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 MEX3CQ5U5Q3 659 aaKnown RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 MAPKAPK5Q8IW41 473 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
COL12A1-205ENST00000425443 SGSM3Q96HU1 749 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 FUT8Q9BYC5 575 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 VPS16Q9H269 839 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
COL12A1-205ENST00000425443 MYH8P13535 1937 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 GYPCP04921 128 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 OAS2P29728 719 aaKnown RBP14.63□□□□□ -0.07
COL12A1-205ENST00000425443 TXLNAP40222 546 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 CDKAL1Q5VV42 579 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 IQUBQ8NA54 791 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 ACRBPQ8NEB7 543 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 MTRQ99707 1265 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 ARGLU1Q9NWB6 273 aaPredicted RBP14.63□□□□□ -0.07
COL12A1-205ENST00000425443 COL5A3P25940 1745 aaPredicted RBP14.63□□□□□ -0.07
COL12A1-205ENST00000425443 CCDC194A0A1B0GVG4 234 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 USP17L3A6NCW0 530 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 USP17L4A6NCW7 530 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 TM4SF1P30408 202 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 IL17AQ16552 155 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 NBPF20Q3BBV1 942 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 C12orf60Q5U649 245 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 USP17L1Q7RTZ2 530 aa14.63□□□□□ -0.07
COL12A1-205ENST00000425443 XDHP47989 1333 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 H3BQF6 201 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 HEATR3Q7Z4Q2 680 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 GPR161Q8N6U8 529 aaKnown RBP14.62□□□□□ -0.07
COL12A1-205ENST00000425443 NCAPGQ9BPX3 1015 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 CALCOCO1Q9P1Z2 691 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 UFL1O94874 794 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms