RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 RARBP10826 455 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-209ENST00000425239 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 FGD4Q96M96 766 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 FAM161BQ96MY7 647 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 SLF1Q9BQI6 1058 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 SEMA6BQ9H3T3 888 aa17.96■□□□□ 0.47
ATG4B-209ENST00000425239 A0A1W2PQ45 241 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 A0A1W2PQY0 241 aa17.95■□□□□ 0.46
ATG4B-209ENST00000425239 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
ATG4B-209ENST00000425239 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 MSL3Q8N5Y2 521 aaKnown RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 TEX13BQ9BXU2 312 aa17.95■□□□□ 0.46
ATG4B-209ENST00000425239 TTYH1Q9H313 450 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 PRDM5Q9NQX1 630 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-209ENST00000425239 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
ATG4B-209ENST00000425239 RNF113AO15541 343 aaKnown RBP17.94■□□□□ 0.46
ATG4B-209ENST00000425239 ADCY6O43306 1168 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 AKR1A1P14550 325 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 COPB2P35606 906 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
ATG4B-209ENST00000425239 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 RNF180Q86T96 592 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 APPBP2Q92624 585 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 CDX2Q99626 313 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-209ENST00000425239 TSEN34Q9BSV6 310 aaKnown RBP17.94■□□□□ 0.46
ATG4B-209ENST00000425239 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 SYNGAP1Q96PV0 1343 aa17.94■□□□□ 0.46
ATG4B-209ENST00000425239 MINDY4BA8MYZ0 360 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 M0R2C6 588 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 GPAA1O43292 621 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 IRX5P78411 483 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-209ENST00000425239 SNRNP48Q6IEG0 339 aaKnown RBP17.93■□□□□ 0.46
ATG4B-209ENST00000425239 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-209ENST00000425239 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 COL25A1Q9BXS0 654 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-209ENST00000425239 MKNK2Q9HBH9 465 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 SLC38A10Q9HBR0 1119 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 MTMR4Q9NYA4 1195 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 MYH4Q9Y623 1939 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
ATG4B-209ENST00000425239 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
ATG4B-209ENST00000425239 CLTBP09497 229 aa17.92■□□□□ 0.46
ATG4B-209ENST00000425239 ACLYP53396 1101 aa17.92■□□□□ 0.46
ATG4B-209ENST00000425239 ZNF697Q5TEC3 545 aa17.92■□□□□ 0.46
ATG4B-209ENST00000425239 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
ATG4B-209ENST00000425239 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
ATG4B-209ENST00000425239 CHD9Q3L8U1 2897 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 MYADML2A6NDP7 307 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 CTAGE5O15320 804 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 RAD21O60216 631 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 PRDM1O75626 825 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 CDK7P50613 346 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATG4B-209ENST00000425239 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 SEC62Q99442 399 aaKnown RBP17.91■□□□□ 0.46
ATG4B-209ENST00000425239 RAVER2Q9HCJ3 691 aaKnown RBP17.91■□□□□ 0.46
ATG4B-209ENST00000425239 SYNPO2Q9UMS6 1093 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 CNPY2Q9Y2B0 182 aa17.91■□□□□ 0.46
ATG4B-209ENST00000425239 FOXP2O15409 715 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 DUSP11O75319 330 aaKnown RBP17.9■□□□□ 0.46
ATG4B-209ENST00000425239 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-209ENST00000425239 NKX3-2P78367 333 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 KCNA10Q16322 511 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 CPXCR1Q8N123 301 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 GMCL1P1Q8NEA9 526 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 FAM184BQ9ULE4 1060 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 MCM3APO60318 1980 aa17.9■□□□□ 0.46
ATG4B-209ENST00000425239 MOXD2PA6NHM9 499 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 GNAT2P19087 354 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 CST5P28325 142 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-209ENST00000425239 C16orf59Q7L2K0 433 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 ZNF444Q8N0Y2 327 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-209ENST00000425239 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 DDX11Q96FC9 970 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 FEM1BQ9UK73 627 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 TBX21Q9UL17 535 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 ZNF536O15090 1300 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 PLIN4Q96Q06 1357 aa17.89■□□□□ 0.45
ATG4B-209ENST00000425239 PQBP1O60828 265 aaKnown RBP17.88■□□□□ 0.45
ATG4B-209ENST00000425239 ZBED4O75132 1171 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 TTLL1O95922 423 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 OAZ1P54368 228 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-209ENST00000425239 KIFC2Q96AC6 838 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 UPF3AQ9H1J1 476 aaKnown RBP17.88■□□□□ 0.45
ATG4B-209ENST00000425239 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 TMEM39AQ9NV64 488 aa17.88■□□□□ 0.45
ATG4B-209ENST00000425239 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-209ENST00000425239 RAG1P15918 1043 aa17.87■□□□□ 0.45
ATG4B-209ENST00000425239 GJA9P57773 515 aa17.87■□□□□ 0.45
ATG4B-209ENST00000425239 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
ATG4B-209ENST00000425239 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms