RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
DDR1-234ENST00000424544 TACC3Q9Y6A5 838 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 DNAJC25-GNG10A0A024R161 153 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 PGK2P07205 417 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 SYN1P17600 705 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 TFAP4Q01664 338 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 PDE4BQ07343 736 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 ALX1Q15699 326 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
DDR1-234ENST00000424544 NAPBQ9H115 298 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 SLC38A10Q9HBR0 1119 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 IL17RBQ9NRM6 502 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 ANAPC4Q9UJX5 808 aa19.23■□□□□ 0.67
DDR1-234ENST00000424544 RAD21O60216 631 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
DDR1-234ENST00000424544 KCTD2Q14681 263 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 FAM47AQ5JRC9 791 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 VPS53Q5VIR6 699 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 MAMDC4Q6UXC1 1216 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 CCDC129Q6ZRS4 1044 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 SMC5Q8IY18 1101 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 INCENPQ9NQS7 918 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 HELLSQ9NRZ9 838 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 FEM1BQ9UK73 627 aa19.22■□□□□ 0.67
DDR1-234ENST00000424544 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
DDR1-234ENST00000424544 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
DDR1-234ENST00000424544 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
DDR1-234ENST00000424544 SNX17Q15036 470 aa19.21■□□□□ 0.67
DDR1-234ENST00000424544 GJC2Q5T442 439 aaPredicted RBP19.21■□□□□ 0.67
DDR1-234ENST00000424544 ANO1Q5XXA6 986 aa19.21■□□□□ 0.67
DDR1-234ENST00000424544 MSL3Q8N5Y2 521 aaKnown RBP19.21■□□□□ 0.67
DDR1-234ENST00000424544 MYH4Q9Y623 1939 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 PLA2G6O60733 806 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 TAL1P17542 331 aaPredicted RBP19.2■□□□□ 0.66
DDR1-234ENST00000424544 OAZ1P54368 228 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 LRRC41Q15345 812 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 LRIT3Q3SXY7 679 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
DDR1-234ENST00000424544 SNRNP48Q6IEG0 339 aaKnown RBP19.2■□□□□ 0.66
DDR1-234ENST00000424544 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
DDR1-234ENST00000424544 LRRC47Q8N1G4 583 aaKnown RBP19.2■□□□□ 0.66
DDR1-234ENST00000424544 LAMA2P24043 3122 aaKnown RBP19.2■□□□□ 0.66
DDR1-234ENST00000424544 COL6A3P12111 3177 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 ZBED4O75132 1171 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 SNAI1O95863 264 aaPredicted RBP19.19■□□□□ 0.66
DDR1-234ENST00000424544 FDX1P10109 184 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 BMP3P12645 472 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 C1orf53Q5VUE5 145 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 GPR153Q6NV75 609 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 SLC39A5Q6ZMH5 540 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 GMCL1Q96IK5 515 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 FGD4Q96M96 766 aa19.19■□□□□ 0.66
DDR1-234ENST00000424544 ORC4O43929 436 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 FGAP02671 866 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
DDR1-234ENST00000424544 TDHQ8IZJ6 230 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 KIFC2Q96AC6 838 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 FAM227BQ96M60 508 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 RAVER2Q9HCJ3 691 aaKnown RBP19.18■□□□□ 0.66
DDR1-234ENST00000424544 ZNF536O15090 1300 aa19.18■□□□□ 0.66
DDR1-234ENST00000424544 ATN1P54259 1190 aaPredicted RBP19.17■□□□□ 0.66
DDR1-234ENST00000424544 MCMDC2Q4G0Z9 681 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 OSBPL3Q9H4L5 887 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 ZBTB47Q9UFB7 747 aaPredicted RBP19.17■□□□□ 0.66
DDR1-234ENST00000424544 PHF24Q9UPV7 400 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 PLXNA1Q9UIW2 1896 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
DDR1-234ENST00000424544 A0A0D9SFI3 127 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 RTP1P59025 263 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 RCSD1Q6JBY9 416 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 CHURC1Q8WUH1 139 aa19.16■□□□□ 0.66
DDR1-234ENST00000424544 NMT2O60551 498 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 ADAMTS4O75173 837 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 HSPD1P10809 573 aaKnown RBP19.15■□□□□ 0.66
DDR1-234ENST00000424544 RARBP10826 455 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 MCCP23508 829 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 ADCYAP1R1P41586 468 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
DDR1-234ENST00000424544 LNPKQ9C0E8 428 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 TCP11L1Q9NUJ3 509 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 FBXO40Q9UH90 709 aa19.15■□□□□ 0.66
DDR1-234ENST00000424544 KBTBD13C9JR72 458 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 AKR1A1P14550 325 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 SLC1A4P43007 532 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 STAT2P52630 851 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 MDM2Q00987 491 aaPredicted RBP19.14■□□□□ 0.65
DDR1-234ENST00000424544 CCSAPQ6IQ19 270 aaPredicted RBP19.14■□□□□ 0.65
DDR1-234ENST00000424544 ZNF589Q86UQ0 364 aaPredicted RBP19.14■□□□□ 0.65
DDR1-234ENST00000424544 FAM160B2Q86V87 743 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 KLHDC9Q8NEP7 349 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 KATNBL1Q9H079 304 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms