RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 GOPCQ9HD26 462 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 DDX19BQ9UMR2 479 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 DIS3Q9Y2L1 958 aaKnown RBP14.08□□□□□ -0.16
PLOD3-204ENST00000424135 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 SYNRGQ9UMZ2 1314 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 PLXNA1Q9UIW2 1896 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 DNAJC25-GNG10A0A024R161 153 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 F5H6K3 240 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 PRDM1O75626 825 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 PTGS1P23219 599 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 ACLYP53396 1101 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 KLRC3Q07444 240 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 SNRNP48Q6IEG0 339 aaKnown RBP14.07□□□□□ -0.16
PLOD3-204ENST00000424135 RNF180Q86T96 592 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 KLHDC9Q8NEP7 349 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 RNPC3Q96LT9 517 aaKnown RBP14.07□□□□□ -0.16
PLOD3-204ENST00000424135 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 ROBO3Q96MS0 1386 aa14.07□□□□□ -0.16
PLOD3-204ENST00000424135 MUC3AQ02505 3323 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 M0R2C6 588 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 AKR1A1P14550 325 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 RAG1P15918 1043 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 GRIN2CQ14957 1233 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 KCNA10Q16322 511 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 SBK1Q52WX2 424 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 AMOTL1Q8IY63 956 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 TEX13BQ9BXU2 312 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 RAVER2Q9HCJ3 691 aaKnown RBP14.06□□□□□ -0.16
PLOD3-204ENST00000424135 TMEM39AQ9NV64 488 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 CLIP2Q9UDT6 1046 aa14.06□□□□□ -0.16
PLOD3-204ENST00000424135 ZHX1Q9UKY1 873 aaPredicted RBP14.06□□□□□ -0.16
PLOD3-204ENST00000424135 DDX49Q9Y6V7 483 aaKnown RBP14.06□□□□□ -0.16
PLOD3-204ENST00000424135 MYH7P12883 1935 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 MAMDC4Q6UXC1 1216 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 C16orf59Q7L2K0 433 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 ANKRD33Q7Z3H0 272 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
PLOD3-204ENST00000424135 LRRCC1Q9C099 1032 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 NYAP2Q9P242 653 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 ARPP21Q9UBL0 812 aaPredicted RBP14.05□□□□□ -0.16
PLOD3-204ENST00000424135 TBX21Q9UL17 535 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
PLOD3-204ENST00000424135 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 CTAGE5O15320 804 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 MS4A1P11836 297 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 FOSL2P15408 326 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 FPGSQ05932 587 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 CEP95Q96GE4 821 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 DDRGK1Q96HY6 314 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 SEC62Q99442 399 aaKnown RBP14.04□□□□□ -0.16
PLOD3-204ENST00000424135 MKNK2Q9HBH9 465 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 STARD7Q9NQZ5 370 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
PLOD3-204ENST00000424135 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.04□□□□□ -0.16
PLOD3-204ENST00000424135 GPAA1O43292 621 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 PBX2P40425 430 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 CDK7P50613 346 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 ACVR2BQ13705 512 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 ZSCAN25Q6NSZ9 544 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 KBTBD3Q8NAB2 608 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
PLOD3-204ENST00000424135 DDX11Q96FC9 970 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.169e-8■■■□□ 17.9
PLOD3-204ENST00000424135 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
PLOD3-204ENST00000424135 KATNBL1Q9H079 304 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 PRDM6Q9NQX0 595 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 FAM184BQ9ULE4 1060 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 SYNGAP1Q96PV0 1343 aa14.03□□□□□ -0.16
PLOD3-204ENST00000424135 ASTN1O14525 1302 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.02□□□□□ -0.17
PLOD3-204ENST00000424135 ATP2A1O14983 1001 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 RNF113AO15541 343 aaKnown RBP14.02□□□□□ -0.17
PLOD3-204ENST00000424135 DUSP11O75319 330 aaKnown RBP14.02□□□□□ -0.17
PLOD3-204ENST00000424135 TIMP1P01033 207 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 C6orf222P0C671 652 aaPredicted RBP14.02□□□□□ -0.17
PLOD3-204ENST00000424135 COPB2P35606 906 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 CNTN2Q02246 1040 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 CCDC144BQ3MJ40 725 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 TMEM63BQ5T3F8 832 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.17
PLOD3-204ENST00000424135 APPBP2Q92624 585 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 MKL1Q969V6 931 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 MCM3APO60318 1980 aa14.02□□□□□ -0.17
PLOD3-204ENST00000424135 DCDC2CA8MYV0 355 aa14.01□□□□□ -0.17
PLOD3-204ENST00000424135 ZBED4O75132 1171 aa14.01□□□□□ -0.17
PLOD3-204ENST00000424135 ASGR1P07306 291 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms