RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CALM2P0DP24 149 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 CALM3P0DP25 149 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 UBA7P41226 1012 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
PTPRN-204ENST00000423636 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
PTPRN-204ENST00000423636 ERCC6LQ2NKX8 1250 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 PRIMPOLQ96LW4 560 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 SYNRGQ9UMZ2 1314 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 DOCK2Q92608 1830 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 POTEMA6NI47 508 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 TDP2O95551 362 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 RBL2Q08999 1139 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
PTPRN-204ENST00000423636 HOOK1Q9UJC3 728 aaKnown RBP13.51□□□□□ -0.25
PTPRN-204ENST00000423636 FCER1AP12319 257 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
PTPRN-204ENST00000423636 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-204ENST00000423636 STXBP3O00186 592 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 CDC25BP30305 580 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 PRCPP42785 496 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USH1GQ495M9 461 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 DTHD1Q6ZMT9 781 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 LAMB2P55268 1798 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 CASP14P31944 242 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 KLK7P49862 253 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 LRRC41Q15345 812 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 BCORQ6W2J9 1755 aa13.5□□□□□ -0.25
PTPRN-204ENST00000423636 LDHCP07864 332 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 FGRP09769 529 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 IGSF22Q8N9C0 903 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 GLIS3Q8NEA6 775 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 WDR24Q96S15 920 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 N4BP3O15049 544 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 IDEP14735 1019 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 ATP2B4P23634 1241 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
PTPRN-204ENST00000423636 GSTO1P78417 241 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 IQUBQ8NA54 791 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 BAG1Q99933 345 aaPredicted RBP13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
PTPRN-204ENST00000423636 IKBKBO14920 756 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 MARCH6O60337 910 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 GNG11P61952 73 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 AOC3Q16853 763 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 ACRBPQ8NEB7 543 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 PDCL3Q9H2J4 239 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
PTPRN-204ENST00000423636 SLC37A4O43826 429 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 PLCG1P19174 1290 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 GRM4Q14833 912 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 OSBPL5Q9H0X9 879 aaPredicted RBP13.48□□□□□ -0.25
PTPRN-204ENST00000423636 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
PTPRN-204ENST00000423636 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
PTPRN-204ENST00000423636 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 DDTLA6NHG4 134 aaPredicted RBP13.48□□□□□ -0.25
PTPRN-204ENST00000423636 FXR1P51114 621 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPRN-204ENST00000423636 GSDMDP57764 484 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 DGKHQ86XP1 1220 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 TC2NQ8N9U0 490 aa13.48□□□□□ -0.25
PTPRN-204ENST00000423636 UBXN2AP68543 259 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 NAALADL2Q58DX5 795 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 ST7Q9NRC1 585 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 TRIM10Q9UDY6 481 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 RPN1P04843 607 aaKnown RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 ENOX2Q16206 610 aaKnown RBP13.47□□□□□ -0.25
PTPRN-204ENST00000423636 SPECC1LQ69YQ0 1117 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 NYAP1Q6ZVC0 841 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 MLKLQ8NB16 471 aa13.47□□□□□ -0.25
PTPRN-204ENST00000423636 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms