RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 BEND3Q5T5X7 828 aa2.58□□□□□ -2
UBE2W-202ENST00000422906 PEAR1Q5VY43 1037 aaPredicted RBP2.58□□□□□ -2
UBE2W-202ENST00000422906 DPP8Q6V1X1 898 aaPredicted RBP2.58□□□□□ -2
UBE2W-202ENST00000422906 SPATA3Q8NHX4 192 aa2.58□□□□□ -2
UBE2W-202ENST00000422906 ATOH1Q92858 354 aaPredicted RBP2.58□□□□□ -2
UBE2W-202ENST00000422906 LBHD1Q9BQE6 289 aaPredicted RBP2.58□□□□□ -2
UBE2W-202ENST00000422906 MAF1Q9H063 256 aa2.58□□□□□ -2
UBE2W-202ENST00000422906 ZNF652Q9Y2D9 606 aa2.58□□□□□ -2
UBE2W-202ENST00000422906 ANKRD36A6QL64 1941 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 CKAP5Q14008 2032 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 CELSR2Q9HCU4 2923 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 J3QKU1 62 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 FOXP2O15409 715 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 SHOX2O60902 331 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 U2AF1L5P0DN76 240 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 DNAJB2P25686 324 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 GJA9P57773 515 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 U2AF1Q01081 240 aaKnown RBP eCLIP2.57□□□□□ -2
UBE2W-202ENST00000422906 MGAT3Q09327 533 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 MBTPS1Q14703 1052 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 MFSD5Q6N075 450 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 RPAINQ86UA6 219 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 FAM151AQ8WW52 585 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 SYTL4Q96C24 671 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 PANK3Q9H999 370 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 DCHS2Q6V1P9 2916 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 BTBD11A6QL63 1104 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 LILRB3O75022 631 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 PAPSS2O95340 614 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 PIP4K2AP48426 406 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 MTX1Q13505 466 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 NFE2L2Q16236 605 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 ZC3H14Q6PJT7 736 aaKnown RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 PAXIP1Q6ZW49 1069 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 HLA-CQ95604 372 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 GREM2Q9H772 168 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 DBF4Q9UBU7 674 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 ZNF536O15090 1300 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 ZNF316A6NFI3 1004 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 CCL14Q16627 93 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 ARMCX2Q7L311 632 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 PHOSPHO2Q8TCD6 241 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 TIFAQ96CG3 184 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 OSBPL5Q9H0X9 879 aaPredicted RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 EHD4Q9H223 541 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 BTBD7Q9P203 1132 aa2.57□□□□□ -2
UBE2W-202ENST00000422906 DDX20Q9UHI6 824 aaKnown RBP2.57□□□□□ -2
UBE2W-202ENST00000422906 SYNRGQ9UMZ2 1314 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 GPR75-ASB3A0A0A6YYF3 556 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 TCRBV5S4A2TA0A5A2 114 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 TBC1D4O60343 1298 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 PDE8AO60658 829 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 COBLO75128 1261 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 SNAI1O95863 264 aaPredicted RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 ZXDAP98168 799 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 SHROOM1Q2M3G4 852 aaPredicted RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 SCYL3Q8IZE3 742 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 RASGRP4Q8TDF6 673 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 SECISBP2LQ93073 1101 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 EMID1Q96A84 441 aaPredicted RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 SAMD11Q96NU1 681 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 EPAS1Q99814 870 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.56□□□□□ -2
UBE2W-202ENST00000422906 TMEM39BQ9GZU3 492 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ZNF576Q9H609 170 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 UTP20O75691 2785 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 RAI1Q7Z5J4 1906 aaPredicted RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 VPS13BQ7Z7G8 4022 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 A0A1B0GTL3 188 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 MYADML2A6NDP7 307 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ZEB2O60315 1214 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ENTPD3O75355 529 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ARID4AP29374 1257 aaPredicted RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 FLT3LGP49771 235 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 PRAMEF18Q5VWM3 479 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ARMC9Q7Z3E5 817 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 UBALD2Q8IYN6 164 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 DZIP1LQ8IYY4 767 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 SMRP1Q8NCR6 262 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 ZNF622Q969S3 477 aaKnown RBP eCLIP2.56□□□□□ -2
UBE2W-202ENST00000422906 DCPSQ96C86 337 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 APBA2Q99767 749 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 LMNAP02545 664 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 VCPP55072 806 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 RPS8P62241 208 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 PDZD3Q86UT5 571 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 SPATA18Q8TC71 538 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 PNISRQ8TF01 805 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 CHFRQ96EP1 664 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 NOC4LQ9BVI4 516 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 SYNPO2Q9UMS6 1093 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 Q9Y3F1 56 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 SETXQ7Z333 2677 aaKnown RBP2.56□□□□□ -2
UBE2W-202ENST00000422906 DNAH2Q9P225 4427 aa2.56□□□□□ -2
UBE2W-202ENST00000422906 A0A1W2PQ45 241 aaPredicted RBP2.55□□□□□ -2
UBE2W-202ENST00000422906 A0A1W2PQY0 241 aa2.55□□□□□ -2
UBE2W-202ENST00000422906 TBX10O75333 385 aa2.55□□□□□ -2
UBE2W-202ENST00000422906 C1RP00736 705 aa2.55□□□□□ -2
UBE2W-202ENST00000422906 CANXP27824 592 aaKnown RBP2.55□□□□□ -2
UBE2W-202ENST00000422906 DSG2Q14126 1118 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms