RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 GJB1P08034 283 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 COPB2P35606 906 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 FAM160B2Q86V87 743 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 IQCA1Q86XH1 822 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 DCAF4Q8WV16 495 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 KRT23Q9C075 422 aa31.09■■■□□ 2.57
CDK9-202ENST00000421939 CTDP1Q9Y5B0 961 aaPredicted RBP31.09■■■□□ 2.57
CDK9-202ENST00000421939 MKI67P46013 3256 aaKnown RBP31.09■■■□□ 2.57
CDK9-202ENST00000421939 ZBED4O75132 1171 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 HOXC6P09630 235 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 ADORA2AP29274 412 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 TRIM32Q13049 653 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 IKQ13123 557 aaPredicted RBP31.08■■■□□ 2.57
CDK9-202ENST00000421939 CCL14Q16627 93 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 KCTD1Q719H9 257 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 ABRAQ8N0Z2 381 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 CHURC1Q8WUH1 139 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 ZKSCAN3Q9BRR0 538 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 SLC38A10Q9HBR0 1119 aa31.08■■■□□ 2.57
CDK9-202ENST00000421939 PLA2G6O60733 806 aa31.07■■■□□ 2.56
CDK9-202ENST00000421939 CCDC96Q2M329 555 aa31.07■■■□□ 2.56
CDK9-202ENST00000421939 SNRNP48Q6IEG0 339 aaKnown RBP31.07■■■□□ 2.56
CDK9-202ENST00000421939 ESYT1Q9BSJ8 1104 aa31.07■■■□□ 2.56
CDK9-202ENST00000421939 ATP2A1O14983 1001 aa31.06■■■□□ 2.56
CDK9-202ENST00000421939 CYP21A2P08686 494 aa31.06■■■□□ 2.56
CDK9-202ENST00000421939 CCDC178Q5BJE1 867 aa31.06■■■□□ 2.56
CDK9-202ENST00000421939 SHISA4Q96DD7 197 aa31.06■■■□□ 2.56
CDK9-202ENST00000421939 PAK6Q9NQU5 681 aaPredicted RBP31.06■■■□□ 2.56
CDK9-202ENST00000421939 FDX1P10109 184 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 FCER1AP12319 257 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 PRKAR2AP13861 404 aaKnown RBP31.05■■■□□ 2.56
CDK9-202ENST00000421939 GJA8P48165 433 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 MAP3K21Q5TCX8 1036 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 DPP9Q86TI2 863 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 DGKHQ86XP1 1220 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 CPXCR1Q8N123 301 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 MAP4K1Q92918 833 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.05■■■□□ 2.56
CDK9-202ENST00000421939 ZSWIM5Q9P217 1185 aa31.05■■■□□ 2.56
CDK9-202ENST00000421939 OAZ1P54368 228 aa31.04■■■□□ 2.56
CDK9-202ENST00000421939 KIAA1211Q6ZU35 1233 aa31.04■■■□□ 2.56
CDK9-202ENST00000421939 NPLOC4Q8TAT6 608 aa31.04■■■□□ 2.56
CDK9-202ENST00000421939 U2AF1L4Q8WU68 220 aaKnown RBP31.04■■■□□ 2.56
CDK9-202ENST00000421939 ZSCAN10Q96SZ4 725 aaPredicted RBP31.04■■■□□ 2.56
CDK9-202ENST00000421939 MMP19Q99542 508 aa31.04■■■□□ 2.56
CDK9-202ENST00000421939 RPTORQ8N122 1335 aa31.03■■■□□ 2.56
CDK9-202ENST00000421939 PDHBP11177 359 aa31.03■■■□□ 2.56
CDK9-202ENST00000421939 RAVER2Q9HCJ3 691 aaKnown RBP31.03■■■□□ 2.56
CDK9-202ENST00000421939 HMX1Q9NP08 348 aaPredicted RBP31.03■■■□□ 2.56
CDK9-202ENST00000421939 FLRT1Q9NZU1 646 aa31.03■■■□□ 2.56
CDK9-202ENST00000421939 RBM8AQ9Y5S9 174 aaKnown RBP31.03■■■□□ 2.56
CDK9-202ENST00000421939 TNKSO95271 1327 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 TRDNQ13061 729 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 ERICH6BQ5W0A0 696 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 DEFB118Q96PH6 123 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 UBAC1Q9BSL1 405 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 RIPK3Q9Y572 518 aa31.02■■■□□ 2.56
CDK9-202ENST00000421939 COBLO75128 1261 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 CACNB2Q08289 660 aaPredicted RBP31.01■■■□□ 2.55
CDK9-202ENST00000421939 KCTD2Q14681 263 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 MFSD14CQ5VZR4 134 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 ENAHQ8N8S7 591 aaPredicted RBP31.01■■■□□ 2.55
CDK9-202ENST00000421939 ANKS1AQ92625 1134 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 LSG1Q9H089 658 aaKnown RBP31.01■■■□□ 2.55
CDK9-202ENST00000421939 SLC5A4Q9NY91 659 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 PRR12Q9ULL5 1215 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 TAF6LQ9Y6J9 622 aa31.01■■■□□ 2.55
CDK9-202ENST00000421939 FRMPD2Q68DX3 1309 aaPredicted RBP31■■■□□ 2.55
CDK9-202ENST00000421939 SGPL1O95470 568 aa31■■■□□ 2.55
CDK9-202ENST00000421939 SNHG28P0DPA3 235 aa31■■■□□ 2.55
CDK9-202ENST00000421939 PPP4R2Q9NY27 417 aa31■■■□□ 2.55
CDK9-202ENST00000421939 CDC45O75419 566 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 SLC4A3P48751 1232 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 ZNF543Q08ER8 600 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 TTBK2Q6IQ55 1244 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 CASC1Q6TDU7 716 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 BTNL9Q6UXG8 535 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 PNMA1Q8ND90 353 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 KAT14Q9H8E8 782 aa30.99■■■□□ 2.55
CDK9-202ENST00000421939 PDE4DIPQ5VU43 2346 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 E7EWF7 191 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 OLFML2BQ68BL8 750 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 CYB5R4Q7L1T6 521 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 RALYLQ86SE5 291 aaKnown RBP30.98■■■□□ 2.55
CDK9-202ENST00000421939 GPCPD1Q9NPB8 672 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 ANO2Q9NQ90 1003 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 ZNF536O15090 1300 aa30.98■■■□□ 2.55
CDK9-202ENST00000421939 IGHA2P01877 340 aa30.97■■■□□ 2.55
CDK9-202ENST00000421939 SLC16A2P36021 539 aa30.97■■■□□ 2.55
CDK9-202ENST00000421939 SYDE2Q5VT97 1194 aa30.97■■■□□ 2.55
CDK9-202ENST00000421939 FBXO40Q9UH90 709 aa30.97■■■□□ 2.55
CDK9-202ENST00000421939 PGK2P07205 417 aa30.96■■■□□ 2.55
CDK9-202ENST00000421939 STOX1Q6ZVD7 989 aa30.96■■■□□ 2.55
CDK9-202ENST00000421939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.96■■■□□ 2.55
CDK9-202ENST00000421939 CHST13Q8NET6 341 aa30.96■■■□□ 2.55
CDK9-202ENST00000421939 NCOA7Q8NI08 942 aa30.96■■■□□ 2.55
CDK9-202ENST00000421939 CRISPLD2Q9H0B8 497 aa30.96■■■□□ 2.55
CDK9-202ENST00000421939 ZNFX1Q9P2E3 1918 aaKnown RBP30.96■■■□□ 2.55
CDK9-202ENST00000421939 CAPN2P17655 700 aa30.95■■■□□ 2.55
CDK9-202ENST00000421939 CYP2C19P33261 490 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms