RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CYP19A1P11511 503 aaPredicted RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 TNFAIP1Q13829 316 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 RESP18Q5W5W9 173 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 SOS2Q07890 1332 aaPredicted RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 H0YCG3 227 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 KIF4AO95239 1232 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 BCRP11274 1271 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 GRAPQ13588 217 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 CFAP221Q4G0U5 840 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 GRAPLQ8TC17 118 aaPredicted RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 RWDD2AQ9UIY3 292 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 NCAPH2Q6IBW4 605 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 IFT74Q96LB3 600 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 ZBED4O75132 1171 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 RHOXF2BP0C7M4 288 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 ATP5DP30049 168 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 GTF2IP78347 998 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 CAPZA3Q96KX2 299 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 RHOXF2Q9BQY4 288 aa16.44■□□□□ 0.22
AP000550.1-201ENST00000420508 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 PSMD2Q13200 908 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 ELF2Q15723 593 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 CPDO75976 1380 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 INF2Q27J81 1249 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 MAIP1Q8WWC4 291 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 PCDHB13Q9Y5F0 798 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 CAPN2P17655 700 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 PAK2Q13177 524 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 TCP1P17987 556 aaKnown RBP16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 ARID5AQ03989 594 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 KCNB2Q92953 911 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 BZW2Q9Y6E2 419 aaKnown RBP16.43■□□□□ 0.22
AP000550.1-201ENST00000420508 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 FAM184BQ9ULE4 1060 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 TTLL1O95922 423 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 PTPREP23469 700 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 CALCOCO2Q13137 446 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 C11orf57Q6ZUT1 292 aaPredicted RBP16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 MCF2L2Q86YR7 1114 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 VSTM4Q8IW00 320 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 THAP9Q9H5L6 903 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 COL15A1P39059 1388 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 EXOSC10Q01780 885 aaKnown RBP16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 DPCR1Q3MIW9 517 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 NARFQ9UHQ1 456 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 COL4A3BPQ9Y5P4 624 aa16.42■□□□□ 0.22
AP000550.1-201ENST00000420508 EBAG9O00559 213 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 TMOD4Q9NZQ9 345 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 MAN1B1Q9UKM7 699 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 ANKS4BQ8N8V4 417 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 DDX25Q9UHL0 483 aaKnown RBP16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 IKBKGQ9Y6K9 419 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 ABCD1P33897 745 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 PPP1R18Q6NYC8 613 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 VPS18Q9P253 973 aa16.41■□□□□ 0.22
AP000550.1-201ENST00000420508 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 HYOU1Q9Y4L1 999 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 CERKLQ49MI3 558 aaPredicted RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 WDR78Q5VTH9 848 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 C17orf53Q8N3J3 647 aaPredicted RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 AFAP1L1Q8TED9 768 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms