RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 NACA2Q9H009 215 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 HAUS2Q9NVX0 235 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 CNGA1P29973 690 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 KRT9P35527 623 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 SDR42E1Q8WUS8 393 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 NSRP1Q9H0G5 558 aaKnown RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 MED23Q9ULK4 1368 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 KCTD2Q14681 263 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 BLIDQ8IZY5 108 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 RRAGDQ9NQL2 400 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 BSDC1Q9NW68 430 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 ABT1Q9ULW3 272 aaKnown RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 CAMTA1Q9Y6Y1 1673 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 DAPK3O43293 454 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 SPOPO43791 374 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 KRT19P08727 400 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 DPEP1P16444 411 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 CEP128Q6ZU80 1094 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 CCDC114Q96M63 670 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 SLIT3O75094 1523 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 ABCC6O95255 1503 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 CDHR2Q9BYE9 1310 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 STK10O94804 968 aaKnown RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 BCRP11274 1271 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 CALCOCO2Q13137 446 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 LRRC47Q8N1G4 583 aaKnown RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 SLIT2O94813 1529 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 TNKSO95271 1327 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 OPA1O60313 960 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 FOSP01100 380 aaPredicted RBP9.38□□□□□ -0.91
UBR4-206ENST00000419533 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBR4-206ENST00000419533 HLFQ16534 295 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 FAM160B1Q5W0V3 765 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 METTL13Q8N6R0 699 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 CCDC63Q8NA47 563 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
UBR4-206ENST00000419533 TMEM232C9JQI7 657 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 RAB3IL1Q8TBN0 382 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 CLSTN2Q9H4D0 955 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 CCPG1Q9ULG6 757 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 PCDHB13Q9Y5F0 798 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 ZMYM6O95789 1325 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 GNA14O95837 355 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 C2orf69Q8N8R5 385 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 GABPB2Q8TAK5 448 aaPredicted RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 TTC14Q96N46 770 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 FAM204AQ9H8W3 233 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 NRBP2Q9NSY0 501 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 RNF216Q9NWF9 866 aaPredicted RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 POLR3GO15318 223 aaPredicted RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 CAMTA2O94983 1202 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 PHKA1P46020 1223 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 CCDC122Q5T0U0 273 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 VPS16Q9H269 839 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 BCL9O00512 1426 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 TMOD1P28289 359 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 CHRNA5P30532 468 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 PRR16Q569H4 304 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 FAM102BQ5T8I3 360 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 BAG1Q99933 345 aaPredicted RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 LMNB1P20700 586 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 INF2Q27J81 1249 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 GPATCH4Q5T3I0 446 aaKnown RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 DPP9Q86TI2 863 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 ADPGKQ9BRR6 497 aa9.37□□□□□ -0.91
UBR4-206ENST00000419533 DHX36Q9H2U1 1008 aaKnown RBP9.37□□□□□ -0.91
UBR4-206ENST00000419533 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 CLRN2A0PK11 232 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 E7EVH7 732 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 ZNF202O95125 648 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 SCG2P13521 617 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 POSTNQ15063 836 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms